RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 STK38LQ9Y2H1 464 aa8.26□□□□□ -1.09
NEDD8-207ENST00000533242 TENM4Q6N022 2769 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 LAMA5O15230 3695 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 LY6G6EA0A0G2JKS1 128 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 K7ENP7 123 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 ATP9BO43861 1147 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 UNC5CO95185 931 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 CBX6O95503 412 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 MOCS2O96007 188 aaPredicted RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 APOEP02649 317 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 APRTP07741 180 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 RBMS1P29558 406 aaKnown RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 SDC4P31431 198 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 STIP1P31948 543 aaKnown RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 L1CAMP32004 1257 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 PHBP35232 272 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 ISXQ2M1V0 245 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 TTC39BQ5VTQ0 682 aaPredicted RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 HHATQ5VTY9 493 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 RAP1GAP2Q684P5 730 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 INO80CQ6PI98 192 aaPredicted RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 TAC4Q86UU9 113 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 LRRC6Q86X45 466 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 CHSY1Q86X52 802 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 TP53INP2Q8IXH6 220 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 UNC5BQ8IZJ1 945 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 MAPK15Q8TD08 544 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 LRRC8CQ8TDW0 803 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 AGAP11Q8TF27 550 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 RTP4Q96DX8 246 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 TRIM62Q9BVG3 475 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 DUSP23Q9BVJ7 150 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 PIH1D1Q9NWS0 290 aaKnown RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 SENP1Q9P0U3 644 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 SLC17A6Q9P2U8 582 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 FETUBQ9UGM5 382 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 HAO1Q9UJM8 370 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 SLC25A13Q9UJS0 675 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 DCTN4Q9UJW0 460 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 U3KQA8 63 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 BPTFQ12830 3046 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 MYO18BQ8IUG5 2567 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 HMX2A2RU54 273 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 NEMP2A6NFY4 417 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 F5H5T6 163 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 APOL1O14791 398 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 PYGBP11216 843 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 AKT2P31751 481 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 MLLT3P42568 568 aaPredicted RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 NEK3P51956 506 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 TAS2R38P59533 333 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 BMPR2Q13873 1038 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 KLHL38Q2WGJ6 581 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 POM121L1PQ3SYA9 428 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 OTUD1Q5VV17 481 aaPredicted RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 DCP2Q8IU60 420 aaKnown RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 ATP6V0D2Q8N8Y2 350 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 IFI44Q8TCB0 444 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 SLC7A6OSQ96CW6 309 aaPredicted RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 STAMBPL1Q96FJ0 436 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 BTN2A3PQ96KV6 586 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 FAM111AQ96PZ2 611 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 KCTD15Q96SI1 283 aaPredicted RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 CYTH2Q99418 400 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 MECRQ9BV79 373 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 ABCG4Q9H172 646 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 DHX35Q9H5Z1 703 aaKnown RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.25□□□□□ -1.09
NEDD8-207ENST00000533242 LOC400499M0QZD8 3231 aa8.25□□□□□ -1.09
NEDD8-207ENST00000533242 A0A1W2PQU0 124 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 CFAP73A6NFT4 308 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 PYCARD-AS1I3L0S3 204 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 SCAMP1O15126 338 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 ZWINTO95229 277 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 DHRS4L1P0CG22 281 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 RPL34P49207 117 aaKnown RBP8.24□□□□□ -1.09
NEDD8-207ENST00000533242 CSRP3P50461 194 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 CRADDP78560 199 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 CCDC15Q0P6D6 951 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 TFDP2Q14188 446 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 ZNF284Q2VY69 593 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 BOLA3Q53S33 107 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 PIP5KL1Q5T9C9 394 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 WLSQ5T9L3 541 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 ZNF449Q6P9G9 518 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 XKR5Q6UX68 686 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 ABI3BPQ7Z7G0 1075 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 HORMAD1Q86X24 394 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 PPM1NQ8N819 430 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 SLC46A1Q96NT5 459 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 TBCBQ99426 244 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 CEP41Q9BYV8 373 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 ZNF395Q9H8N7 513 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-207ENST00000533242 SSU72Q9NP77 194 aaKnown RBP8.24□□□□□ -1.09
NEDD8-207ENST00000533242 NCKIPSDQ9NZQ3 722 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 SATB2Q9UPW6 733 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 PCDHGA8Q9Y5G5 932 aa8.24□□□□□ -1.09
NEDD8-207ENST00000533242 USH1CQ9Y6N9 552 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms