RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 CDC20Q12834 499 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 C16orf72Q14CZ0 275 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 CLPPQ16740 277 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 MAP9Q49MG5 647 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 CERCAMQ5T4B2 595 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 MANEALQ5VSG8 457 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 NCBP2-AS2Q69YL0 99 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 CCDC70Q6NSX1 233 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 RWDD4Q6NW29 188 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 C8orf74Q6P047 294 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 C22orf39Q6P5X5 142 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 DRICH1Q6PGQ1 229 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 CCDC137Q6PK04 289 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 MAATS1Q7Z4T9 603 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 PIM3Q86V86 326 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 HID1Q8IV36 788 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 ZNF683Q8IZ20 524 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 ATL2Q8NHH9 583 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 SLC35B2Q8TB61 432 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 P3H4Q92791 437 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 TBC1D31Q96DN5 1066 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 RUNDC3BQ96NL0 473 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 HEPHQ9BQS7 1158 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 DDA1Q9BW61 102 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 FRMD8P1Q9BZ68 369 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 ASPSCR1Q9BZE9 553 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 TNKS2Q9H2K2 1166 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 SEMA6CQ9H3T2 930 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 GPN2Q9H9Y4 310 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 PCYOX1Q9UHG3 505 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 VPS51Q9UID3 782 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 DNPEPQ9ULA0 475 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 TP53TG5Q9Y2B4 290 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 MFHAS1Q9Y4C4 1052 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 ABCA12Q86UK0 2595 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 FAM187AA6NFU0 413 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 DRGXA6NNA5 263 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 ZW10O43264 779 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 NUDT21O43809 227 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 SNAP91O60641 907 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 RAD1O60671 282 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 SEMA7AO75326 666 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 PRKAR1AP10644 381 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 FGF3P11487 239 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 HTR1BP28222 390 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 IGFALSP35858 605 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 NR2C2P49116 596 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 EIF3EP60228 445 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 DR1Q01658 176 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 GBE1Q04446 702 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 SLC10A2Q12908 348 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 PAFAH1B3Q15102 231 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 NOMO1Q15155 1222 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 DEFB109BQ30KR1 87 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 ACBD5Q5T8D3 534 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 TCTN3Q6NUS6 607 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 LRRC31Q6UY01 552 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 PARS2Q7L3T8 475 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 TMPRSS9Q7Z410 1059 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 DCAF4L2Q8NA75 395 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 CEP44Q9C0F1 390 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 ANKZF1Q9H8Y5 726 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 LRIT1Q9P2V4 623 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 FEZ2Q9UHY8 353 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 DMGDHQ9UI17 866 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 VANGL2Q9ULK5 521 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 ZNF148Q9UQR1 794 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 HEY1Q9Y5J3 304 aa11.31□□□□□ -0.6
TRAPPC4-213ENST00000533149 SDK2Q58EX2 2172 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 TTLL8A6PVC2 850 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 MKRN2OSH3BPM6 223 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 H7C0C1 242 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 TTI1O43156 1089 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 RHOCP08134 193 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 MAP4P27816 1152 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 ATP5OP48047 213 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 ARSDP51689 593 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 DHX34Q14147 1143 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 OASLQ15646 514 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 KCTD19Q17RG1 926 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 ALG11Q2TAA5 492 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 CRTC2Q53ET0 693 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 CARD16Q5EG05 197 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 RETSATQ6NUM9 610 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 OGFOD3Q6PK18 319 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 TMCO3Q6UWJ1 677 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 LINGO4Q6UY18 593 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 B4GALNT4Q76KP1 1039 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 BZW1Q7L1Q6 419 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 RD3Q7Z3Z2 195 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 SETD3Q86TU7 594 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 ZC3H18Q86VM9 953 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 SRRM1Q8IYB3 904 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 PCDH20Q8N6Y1 951 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 TSACCQ96A04 125 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 MOCOSQ96EN8 888 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 PARD6BQ9BYG5 372 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 CATSPERBQ9H7T0 1116 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 C10orf88Q9H8K7 445 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 DTLQ9NZJ0 730 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms