RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ZCCHC14Q8WYQ9 949 aaKnown RBP15.26■□□□□ 0.03
CPSF1-210ENST00000532935 ALS2CR12Q96Q35 445 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 ZSCAN5AQ9BUG6 496 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 GSDMCQ9BYG8 508 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 ABCG4Q9H172 646 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 OAS3Q9Y6K5 1087 aaKnown RBP15.26■□□□□ 0.03
CPSF1-210ENST00000532935 LAMA5O15230 3695 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 C5orf60A6NFR6 353 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 B4DGG1 531 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 ASMTLO95671 621 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 AGTP01019 485 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 ATP1A1P05023 1023 aaKnown RBP15.25■□□□□ 0.03
CPSF1-210ENST00000532935 BPIP17213 487 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 AK4P27144 223 aaPredicted RBP15.25■□□□□ 0.03
CPSF1-210ENST00000532935 HMGCLP35914 325 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 PRPSAP1Q14558 356 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 PYCR3Q53H96 274 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 ZNF569Q5MCW4 686 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 CDCP2Q5VXM1 449 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 OGFOD3Q6PK18 319 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 MARK2Q7KZI7 788 aaKnown RBP15.25■□□□□ 0.03
CPSF1-210ENST00000532935 GALNT13Q8IUC8 556 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 TTC30BQ8N4P2 665 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 TRAM1L1Q8N609 369 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 FAM71DQ8N9W8 422 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 SLC35B2Q8TB61 432 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 OR2M4Q96R27 311 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 FICDQ9BVA6 458 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 DPEP2Q9H4A9 486 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 BPIFA1Q9NP55 256 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 HACD3Q9P035 362 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 TAAR2Q9P1P5 351 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 VPS18Q9P253 973 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 PPP2R2CQ9Y2T4 447 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 AAR2Q9Y312 384 aaKnown RBP15.25■□□□□ 0.03
CPSF1-210ENST00000532935 GPSM3Q9Y4H4 160 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 ST14Q9Y5Y6 855 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 KIF26BQ2KJY2 2108 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 CACNA1BQ00975 2339 aa15.25■□□□□ 0.03
CPSF1-210ENST00000532935 NOBOXO60393 691 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 DNAJC6O75061 913 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 CAPNS1P04632 268 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 ADRA1AP35348 466 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 CTBSQ01459 385 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 PDPK2PQ6A1A2 396 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 SLC30A9Q6PML9 568 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 SLC13A5Q86YT5 568 aaPredicted RBP15.24■□□□□ 0.03
CPSF1-210ENST00000532935 SFTPA2Q8IWL1 248 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 OR6C4Q8NGE1 309 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 BLOC1S5Q8TDH9 187 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 ATG4AQ8WYN0 398 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 CCDC74AQ96AQ1 378 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 PPP1R2P1Q96PQ5 205 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 PLEKHG4BQ96PX9 1271 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 CCDC3Q9BQI4 270 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 TMEM121Q9BTD3 319 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 CCDC86Q9H6F5 360 aaKnown RBP15.24■□□□□ 0.03
CPSF1-210ENST00000532935 SPATS2LQ9NUQ6 558 aaKnown RBP15.24■□□□□ 0.03
CPSF1-210ENST00000532935 ZMIZ1Q9ULJ6 1067 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 PLEKHM1Q9Y4G2 1056 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 ACACAQ13085 2346 aa15.24■□□□□ 0.03
CPSF1-210ENST00000532935 CELSR3Q9NYQ7 3312 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 SLC25A14O95258 325 aaPredicted RBP15.23■□□□□ 0.03
CPSF1-210ENST00000532935 OLIG2Q13516 323 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 PEX6Q13608 980 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 C14orf28Q4W4Y0 310 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 RANBP10Q6VN20 620 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 ARHGEF18Q6ZSZ5 1173 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 GLT6D1Q7Z4J2 308 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 TRIM58Q8NG06 486 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 MDM1Q8TC05 714 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 ZDHHC1Q8WTX9 485 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 GLYATL1Q969I3 302 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 DEPDC7Q96QD5 511 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 APOL2Q9BQE5 337 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 FRMD8P1Q9BZ68 369 aaPredicted RBP15.23■□□□□ 0.03
CPSF1-210ENST00000532935 CARD9Q9H257 536 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 RMI1Q9H9A7 625 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 ARFGAP3Q9NP61 516 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 IL17CQ9P0M4 197 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 ZNHIT2Q9UHR6 403 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 RABGEF1Q9UJ41 708 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 PCYT1BQ9Y5K3 369 aaPredicted RBP15.23■□□□□ 0.03
CPSF1-210ENST00000532935 APC2O95996 2303 aa15.23■□□□□ 0.03
CPSF1-210ENST00000532935 ZFHX4Q86UP3 3567 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 DSPP15924 2871 aaKnown RBP15.22■□□□□ 0.03
CPSF1-210ENST00000532935 CASC3O15234 703 aaKnown RBP15.22■□□□□ 0.03
CPSF1-210ENST00000532935 CSO75390 466 aaKnown RBP15.22■□□□□ 0.03
CPSF1-210ENST00000532935 GLB1P16278 677 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 ACTR1BP42025 376 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 GDF10P55107 478 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 ACTR1AP61163 376 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 LRP8Q14114 963 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 HLTFQ14527 1009 aaKnown RBP eCLIP15.22■□□□□ 0.03
CPSF1-210ENST00000532935 PARP6Q2NL67 630 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 CERCAMQ5T4B2 595 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 ZNF648Q5T619 568 aaPredicted RBP15.22■□□□□ 0.03
CPSF1-210ENST00000532935 ZDHHC20Q5W0Z9 365 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 PHYKPLQ8IUZ5 450 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 KLHDC8BQ8IXV7 354 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms