RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 LINGO1Q96FE5 620 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 KIF17Q9P2E2 1029 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 ZNHIT2Q9UHR6 403 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 RNF11Q9Y3C5 154 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 CDC7O00311 574 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 SH3BP5O60239 455 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 KDM1AO60341 852 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 KCNH1O95259 989 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 MAGEA12P43365 314 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 GPR15P49685 360 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 TMED10P49755 219 aaKnown RBP11.28□□□□□ -0.6
NXF1-211ENST00000531709 AGTR2P50052 363 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 KLHL35Q6PF15 583 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 GPRIN3Q6ZVF9 776 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 C16orf59Q7L2K0 433 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 TBC1D21Q8IYX1 336 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 LZICQ8WZA0 190 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 ISOC1Q96CN7 298 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 TMLHEQ9NVH6 421 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 POLG2Q9UHN1 485 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 EIF2B4Q9UI10 523 aaKnown RBP11.28□□□□□ -0.6
NXF1-211ENST00000531709 PCDHGC4Q9Y5F7 938 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 CEPT1Q9Y6K0 416 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 NOBOXO60393 691 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 MYCP01106 439 aaPredicted RBP11.28□□□□□ -0.6
NXF1-211ENST00000531709 AKT1P31749 480 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 RPL38P63173 70 aaKnown RBP11.28□□□□□ -0.6
NXF1-211ENST00000531709 UBXN11Q5T124 520 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 SPOUT1Q5T280 376 aaKnown RBP11.28□□□□□ -0.6
NXF1-211ENST00000531709 RANBP10Q6VN20 620 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 ZNF554Q86TJ5 538 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 ISCA2Q86U28 154 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 SAPCD2Q86UD0 394 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 NT5C3BQ969T7 300 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 ATP13A1Q9HD20 1204 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 SELENONQ9NZV5 590 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 PHF24Q9UPV7 400 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 KCNH4Q9UQ05 1017 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.28□□□□□ -0.6
NXF1-211ENST00000531709 CFAP99D6REC4 459 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 SEC22BO75396 215 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 F2P00734 622 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 CST1P01037 141 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 CNPP09543 421 aaKnown RBP11.28□□□□□ -0.6
NXF1-211ENST00000531709 CAPN3P20807 821 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 OXTRP30559 389 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 RPL9P32969 192 aaKnown RBP11.28□□□□□ -0.6
NXF1-211ENST00000531709 ACVRL1P37023 503 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 KCNC1P48547 511 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 DGKQP52824 942 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 MLLT6P55198 1093 aaPredicted RBP11.28□□□□□ -0.6
NXF1-211ENST00000531709 GNA12Q03113 381 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 ZBED5Q49AG3 693 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 FAM171A1Q5VUB5 890 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 C8orf59Q8N0T1 100 aaPredicted RBP11.28□□□□□ -0.6
NXF1-211ENST00000531709 FAM110BQ8TC76 370 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 HM13Q8TCT9 377 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 IRGQQ8WZA9 623 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 DPY30Q9C005 99 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 FBXO44Q9H4M3 255 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 RUBCNLQ9H714 662 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 PADI3Q9ULW8 664 aa11.28□□□□□ -0.6
NXF1-211ENST00000531709 POLR3HQ9Y535 204 aaPredicted RBP11.28□□□□□ -0.6
NXF1-211ENST00000531709 MCM3APO60318 1980 aa11.27□□□□□ -0.6
NXF1-211ENST00000531709 ATP6V1G1O75348 118 aa11.27□□□□□ -0.6
NXF1-211ENST00000531709 RPP40O75818 363 aaKnown RBP11.27□□□□□ -0.6
NXF1-211ENST00000531709 ZNF182P17025 639 aaPredicted RBP11.27□□□□□ -0.6
NXF1-211ENST00000531709 ARCN1P48444 511 aaKnown RBP11.27□□□□□ -0.6
NXF1-211ENST00000531709 INHBEP58166 350 aa11.27□□□□□ -0.6
NXF1-211ENST00000531709 ARHGEF7Q14155 803 aa11.27□□□□□ -0.6
NXF1-211ENST00000531709 LRRC8DQ7L1W4 858 aa11.27□□□□□ -0.6
NXF1-211ENST00000531709 MON1AQ86VX9 555 aa11.27□□□□□ -0.6
NXF1-211ENST00000531709 CMTR2Q8IYT2 770 aaKnown RBP11.27□□□□□ -0.6
NXF1-211ENST00000531709 TRPV3Q8NET8 790 aa11.27□□□□□ -0.6
NXF1-211ENST00000531709 OR7D4Q8NG98 312 aa11.27□□□□□ -0.6
NXF1-211ENST00000531709 PTERQ96BW5 349 aa11.27□□□□□ -0.6
NXF1-211ENST00000531709 NMUR1Q9HB89 426 aa11.27□□□□□ -0.6
NXF1-211ENST00000531709 KLQ9UEF7 1012 aa11.27□□□□□ -0.6
NXF1-211ENST00000531709 DAPK2Q9UIK4 370 aa11.27□□□□□ -0.6
NXF1-211ENST00000531709 VPS28Q9UK41 221 aa11.27□□□□□ -0.6
NXF1-211ENST00000531709 EIF3LQ9Y262 564 aaKnown RBP11.27□□□□□ -0.6
NXF1-211ENST00000531709 AQP12BA6NM10 295 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 CAPGP40121 348 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 MTHFRP42898 656 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 LEPRP48357 1165 aaKnown RBP11.27□□□□□ -0.61
NXF1-211ENST00000531709 NFE2Q16621 373 aaPredicted RBP11.27□□□□□ -0.61
NXF1-211ENST00000531709 PGS1Q32NB8 556 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 BROXQ5VW32 411 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 GALNT18Q6P9A2 607 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 SLC2A7Q6PXP3 512 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 ALKAL1Q6UXT8 129 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 RETREG3Q86VR2 466 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 AQP12AQ8IXF9 295 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 LINC01465Q8N7H1 131 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 SIDT2Q8NBJ9 832 aaKnown RBP11.27□□□□□ -0.61
NXF1-211ENST00000531709 TOP1MTQ969P6 601 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 ZNF597Q96LX8 424 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 IL12RB2Q99665 862 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 SMPD4Q9NXE4 827 aa11.27□□□□□ -0.61
NXF1-211ENST00000531709 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms