RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 BUD23O43709 281 aaKnown RBP15.19■□□□□ 0.02
CCS-206ENST00000530961 NME1P15531 152 aaKnown RBP15.19■□□□□ 0.02
CCS-206ENST00000530961 PSMA3P25788 255 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 ZNF140P52738 457 aaPredicted RBP15.19■□□□□ 0.02
CCS-206ENST00000530961 HNRNPKP61978 463 aaKnown RBP eCLIP15.19■□□□□ 0.02
CCS-206ENST00000530961 PPARDQ03181 441 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 PCID2Q5JVF3 399 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 PRAMEF14Q5SWL7 426 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 TPRG1LQ5T0D9 272 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 CERCAMQ5T4B2 595 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 HOOK3Q86VS8 718 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 NAT8LQ8N9F0 302 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 OR56A4Q8NGH8 313 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 PTCD2Q8WV60 388 aaKnown RBP15.19■□□□□ 0.02
CCS-206ENST00000530961 COX14Q96I36 57 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 TBATAQ96M53 351 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 LGR4Q9BXB1 951 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 IL21RQ9HBE5 538 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 NLE1Q9NVX2 485 aaPredicted RBP15.19■□□□□ 0.02
CCS-206ENST00000530961 DNAJC28Q9NX36 388 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 KLQ9UEF7 1012 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 CNOT6Q9ULM6 557 aaKnown RBP15.19■□□□□ 0.02
CCS-206ENST00000530961 KCTD3Q9Y597 815 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 DGKBQ9Y6T7 804 aa15.19■□□□□ 0.02
CCS-206ENST00000530961 FADS2P1A8MWK0 482 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 RASGRP1O95267 797 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 IVDP26440 423 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 TERF1P54274 439 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 SESN2P58004 480 aaPredicted RBP15.18■□□□□ 0.02
CCS-206ENST00000530961 SRP54P61011 504 aaKnown RBP15.18■□□□□ 0.02
CCS-206ENST00000530961 C2orf54Q08AI8 447 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 EIF2B5Q13144 721 aaKnown RBP15.18■□□□□ 0.02
CCS-206ENST00000530961 ITGA9Q13797 1035 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 SEPT6Q14141 434 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 MORF4L2Q15014 288 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 CHRNA6Q15825 494 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 KCTD19Q17RG1 926 aaPredicted RBP15.18■□□□□ 0.02
CCS-206ENST00000530961 RNASEH2BQ5TBB1 312 aaKnown RBP15.18■□□□□ 0.02
CCS-206ENST00000530961 ANKRD22Q5VYY1 191 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 DBX2Q6ZNG2 339 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 ZNF534Q76KX8 674 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 BBOF1Q8ND07 529 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 PPHLN1Q8NEY8 458 aaKnown RBP15.18■□□□□ 0.02
CCS-206ENST00000530961 OR2I1PQ8NGU4 316 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 ZNF398Q8TD17 642 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 GLYATL1Q969I3 302 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 VPS35Q96QK1 796 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 FRMD8Q9BZ67 464 aaPredicted RBP15.18■□□□□ 0.02
CCS-206ENST00000530961 SLC13A1Q9BZW2 595 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 SLC17A4Q9Y2C5 497 aa15.18■□□□□ 0.02
CCS-206ENST00000530961 MAGEB16A2A368 324 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 TMEM202A6NGA9 273 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 SDR42E2A6NKP2 422 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 EFCAB8A8MWE9 144 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 GPR89AB7ZAQ6 455 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 H7C0S8 307 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 INPP4BO15327 924 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 TMEM63AO94886 807 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 SLC25A14O95258 325 aaPredicted RBP15.17■□□□□ 0.02
CCS-206ENST00000530961 TNFP01375 233 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 GPR89BP0CG08 455 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 JUNDP17535 347 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 EPHA8P29322 1005 aaPredicted RBP15.17■□□□□ 0.02
CCS-206ENST00000530961 HK3P52790 923 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 PTPRCAPQ14761 206 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 SHBQ15464 509 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 ALG11Q2TAA5 492 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 UAP1L1Q3KQV9 507 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 ATP13A5Q4VNC0 1218 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 ZNF542PQ5EBM4 170 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 TSTD2Q5T7W7 516 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 FAM151BQ6UXP7 276 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 CAND1Q86VP6 1230 aaKnown RBP15.17■□□□□ 0.02
CCS-206ENST00000530961 PHYKPLQ8IUZ5 450 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 PHACTR4Q8IZ21 702 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 OR13C4Q8NGS5 318 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 SAP25Q8TEE9 199 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 SNF8Q96H20 258 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 CDKN2AIPNLQ96HQ2 116 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 DNAJC1Q96KC8 554 aaKnown RBP15.17■□□□□ 0.02
CCS-206ENST00000530961 SERPINB12Q96P63 405 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 ERP44Q9BS26 406 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 TRIM39Q9HCM9 518 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 SMOXQ9NWM0 555 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 VPS18Q9P253 973 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 SPASTQ9UBP0 616 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 FKBPLQ9UIM3 349 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 TCAF1Q9Y4C2 921 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 NUMA1Q14980 2115 aa15.17■□□□□ 0.02
CCS-206ENST00000530961 CTAGE15A4D2H0 777 aa15.16■□□□□ 0.02
CCS-206ENST00000530961 NEMP2A6NFY4 417 aa15.16■□□□□ 0.02
CCS-206ENST00000530961 RAD51CO43502 376 aa15.16■□□□□ 0.02
CCS-206ENST00000530961 ZNF500O60304 480 aaPredicted RBP15.16■□□□□ 0.02
CCS-206ENST00000530961 PIAS2O75928 621 aa15.16■□□□□ 0.02
CCS-206ENST00000530961 SRP72O76094 671 aaKnown RBP15.16■□□□□ 0.02
CCS-206ENST00000530961 PRAMEF1O95521 474 aa15.16■□□□□ 0.02
CCS-206ENST00000530961 CEACAM5P06731 702 aa15.16■□□□□ 0.02
CCS-206ENST00000530961 IVLP07476 585 aa15.16■□□□□ 0.02
CCS-206ENST00000530961 CTAGE8P0CG41 777 aa15.16■□□□□ 0.02
CCS-206ENST00000530961 XIAPP98170 497 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms