RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ACSM2BQ68CK6 577 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 METTL2BQ6P1Q9 378 aaKnown RBP4.61□□□□□ -1.67
C11orf88-204ENST00000529661 PQLC2Q6ZP29 291 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 HIST3H2AQ7L7L0 130 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 KBTBD6Q86V97 674 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 DNAAF5Q86Y56 855 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 SPATA6LQ8N4H0 392 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 AVL9Q8NBF6 648 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 SMRP1Q8NCR6 262 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 TMED6Q8WW62 240 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 ERGIC1Q969X5 290 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 RRNAD1Q96FB5 475 aaKnown RBP4.61□□□□□ -1.67
C11orf88-204ENST00000529661 METTL2AQ96IZ6 378 aaKnown RBP4.61□□□□□ -1.67
C11orf88-204ENST00000529661 GCNAQ96QF7 691 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 ACOX2Q99424 681 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 BAG1Q99933 345 aaPredicted RBP4.61□□□□□ -1.67
C11orf88-204ENST00000529661 OSGEPL1Q9H4B0 414 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 GPR108Q9NPR9 543 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 CD93Q9NPY3 652 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 HINT3Q9NQE9 182 aaKnown RBP4.61□□□□□ -1.67
C11orf88-204ENST00000529661 ARHGEF38Q9NXL2 777 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 CISD1Q9NZ45 108 aaKnown RBP4.61□□□□□ -1.67
C11orf88-204ENST00000529661 PADI1Q9ULC6 663 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 R3HDM2Q9Y2K5 976 aaKnown RBP4.61□□□□□ -1.67
C11orf88-204ENST00000529661 PTRH2Q9Y3E5 179 aaKnown RBP4.61□□□□□ -1.67
C11orf88-204ENST00000529661 MAGED1Q9Y5V3 778 aaPredicted RBP4.61□□□□□ -1.67
C11orf88-204ENST00000529661 FAM169AQ9Y6X4 670 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 A0A1B0GVM2 712 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 A0A1W2PR77 199 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 GLOD5A6NK44 160 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 PRSS44E7EML9 344 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 PRR23D1E9PI22 279 aaPredicted RBP4.6□□□□□ -1.67
C11orf88-204ENST00000529661 H7C0S8 307 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 UBE2CO00762 179 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 ACOT8O14734 319 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 PRR23D2P0DMB1 279 aaPredicted RBP4.6□□□□□ -1.67
C11orf88-204ENST00000529661 DDX5P17844 614 aaKnown RBP4.6□□□□□ -1.67
C11orf88-204ENST00000529661 TRIM21P19474 475 aaKnown RBP4.6□□□□□ -1.67
C11orf88-204ENST00000529661 AMTP48728 403 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 PDLIM4P50479 330 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 STAT2P52630 851 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 MRPS34P82930 218 aaKnown RBP4.6□□□□□ -1.67
C11orf88-204ENST00000529661 GRIK2Q13002 908 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 CDC16Q13042 620 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 HLFQ16534 295 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 ARMC3Q5W041 872 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 SIGIRRQ6IA17 410 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 C8orf82Q6P1X6 216 aaPredicted RBP4.6□□□□□ -1.67
C11orf88-204ENST00000529661 ANKRD23Q86SG2 305 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 MCEMP1Q8IX19 187 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 DCP1BQ8IZD4 617 aaKnown RBP4.6□□□□□ -1.67
C11orf88-204ENST00000529661 RBMXL3Q8N7X1 1067 aaKnown RBP4.6□□□□□ -1.67
C11orf88-204ENST00000529661 HRH4Q9H3N8 390 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 NDST4Q9H3R1 872 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 C6orf106Q9H6K1 298 aaPredicted RBP4.6□□□□□ -1.67
C11orf88-204ENST00000529661 SLC35C2Q9NQQ7 365 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.6□□□□□ -1.67
C11orf88-204ENST00000529661 CWC15Q9P013 229 aaKnown RBP4.6□□□□□ -1.67
C11orf88-204ENST00000529661 COPG2Q9UBF2 871 aa4.6□□□□□ -1.67
C11orf88-204ENST00000529661 LOC100509620A0A075B734 347 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 IGHV4-28A0A0C4DH34 117 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 LINC01553A4QN01 128 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 KCNJ13O60928 360 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 SOX30O94993 753 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 FCGR1AP12314 374 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 MAOAP21397 527 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 C21orf33P30042 268 aaPredicted RBP4.59□□□□□ -1.67
C11orf88-204ENST00000529661 PRCPP42785 496 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 LMAN1P49257 510 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 SUOXP51687 545 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 POU5F1Q01860 360 aaKnown RBP4.59□□□□□ -1.67
C11orf88-204ENST00000529661 TRAF2Q12933 501 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 PRPF4BQ13523 1007 aaKnown RBP4.59□□□□□ -1.67
C11orf88-204ENST00000529661 CTTNQ14247 550 aaKnown RBP4.59□□□□□ -1.67
C11orf88-204ENST00000529661 TMEM266Q2M3C6 531 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 C15orf59Q2T9L4 293 aaPredicted RBP4.59□□□□□ -1.67
C11orf88-204ENST00000529661 KRT79Q5XKE5 535 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 TMEM198Q66K66 360 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 DENND5BQ6ZUT9 1274 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 CREB3L2Q70SY1 520 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 DPPA4Q7L190 304 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 NKAIN3Q8N8D7 197 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 OR8K5Q8NH50 307 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 ARRDC2Q8TBH0 407 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 TRPC4APQ8TEL6 797 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 TRIB2Q92519 343 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 TXNDC15Q96J42 360 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 RADILQ96JH8 1075 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 FAM84BQ96KN1 310 aaPredicted RBP4.59□□□□□ -1.67
C11orf88-204ENST00000529661 EGLN2Q96KS0 407 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 ZMAT2Q96NC0 199 aaKnown RBP4.59□□□□□ -1.67
C11orf88-204ENST00000529661 ABHD1Q96SE0 405 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 SH3GL2Q99962 352 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 KIFC3Q9BVG8 833 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 APOL6Q9BWW8 343 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 AP1M1Q9BXS5 423 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 MRPL1Q9BYD6 325 aaKnown RBP4.59□□□□□ -1.67
C11orf88-204ENST00000529661 OR10A4Q9H209 315 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 MAGIXQ9H6Y5 334 aa4.59□□□□□ -1.67
C11orf88-204ENST00000529661 SLC28A3Q9HAS3 691 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms