RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ST14Q9Y5Y6 855 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 MRPS18BQ9Y676 258 aaKnown RBP8.93□□□□□ -0.98
VPS11-203ENST00000529545 A1L4Q6 167 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 OR5K4A6NMS3 321 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 K7EM74 188 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 HTRA2O43464 458 aaPredicted RBP8.92□□□□□ -0.98
VPS11-203ENST00000529545 UNGP13051 313 aaPredicted RBP8.92□□□□□ -0.98
VPS11-203ENST00000529545 CHRNB2P17787 502 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 CASP14P31944 242 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 PTP4A2Q12974 167 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 CAMK4Q16566 473 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 PYCR3Q53H96 274 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.92□□□□□ -0.98
VPS11-203ENST00000529545 ADAMTSL4Q6UY14 1074 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 USP45Q70EL2 814 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 PHF13Q86YI8 300 aaPredicted RBP8.92□□□□□ -0.98
VPS11-203ENST00000529545 RASGRP3Q8IV61 690 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 GALNT6Q8NCL4 622 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 NSMCE1Q8WV22 266 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 SEC14L1Q92503 715 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 MRGPRX2Q96LB1 330 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 MCEEQ96PE7 176 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 HERPUD2Q9BSE4 406 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 TWSG1Q9GZX9 223 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 VPS16Q9H269 839 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 DHX35Q9H5Z1 703 aaKnown RBP8.92□□□□□ -0.98
VPS11-203ENST00000529545 DACH1Q9UI36 760 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 CROTQ9UKG9 612 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 AP4E1Q9UPM8 1137 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 PCDHGC4Q9Y5F7 938 aa8.92□□□□□ -0.98
VPS11-203ENST00000529545 OAS3Q9Y6K5 1087 aaKnown RBP8.92□□□□□ -0.98
VPS11-203ENST00000529545 RP1L1Q8IWN7 2480 aaPredicted RBP8.92□□□□□ -0.98
VPS11-203ENST00000529545 KIR2DS5A0A0G2JLQ3 304 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 A0A0G2JNG1 304 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 KIR2DS3K7RE56 304 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 SNX2O60749 519 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 CREG1O75629 220 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 RECKO95980 971 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 MT-ND3P03897 115 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 TPM2P07951 284 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 ANKRD34CP0C6C1 535 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 ERCC2P18074 760 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 LHCGRP22888 699 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 F8A1P23610 371 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 VARSP26640 1264 aaKnown RBP8.91□□□□□ -0.98
VPS11-203ENST00000529545 SOX5P35711 763 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 SMCPP49901 116 aaPredicted RBP8.91□□□□□ -0.98
VPS11-203ENST00000529545 PGDP52209 483 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 POLR2FP61218 127 aaKnown RBP8.91□□□□□ -0.98
VPS11-203ENST00000529545 SLC10A7Q0GE19 358 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 IL11RAQ14626 422 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 KIR2DS5Q14953 304 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 CLEC16AQ2KHT3 1053 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 HSP90AA4PQ58FG1 418 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 RALGPS1Q5JS13 557 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 ERMARDQ5T6L9 678 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 ARMC12Q5T9G4 340 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 CYB5D1Q6P9G0 228 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 IYDQ6PHW0 289 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 RFX8Q6ZV50 586 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 CHST15Q7LFX5 561 aaPredicted RBP8.91□□□□□ -0.98
VPS11-203ENST00000529545 TECPR1Q7Z6L1 1165 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 APLFQ8IW19 511 aaPredicted RBP8.91□□□□□ -0.98
VPS11-203ENST00000529545 CBARPQ8N350 705 aaPredicted RBP8.91□□□□□ -0.98
VPS11-203ENST00000529545 EXD1Q8NHP7 514 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 SCRN2Q96FV2 425 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 NUDCD1Q96RS6 583 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 SLC29A3Q9BZD2 475 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 ABCG8Q9H221 673 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 CASS4Q9NQ75 786 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 GPATCH2LQ9NWQ4 482 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 CD84Q9UIB8 345 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 LNPEPQ9UIQ6 1025 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 PADI1Q9ULC6 663 aa8.91□□□□□ -0.98
VPS11-203ENST00000529545 RELNP78509 3460 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 MN1Q10571 1320 aaPredicted RBP8.9□□□□□ -0.98
VPS11-203ENST00000529545 A6NCN8 305 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 NPIPB15A6NHN6 443 aaPredicted RBP8.9□□□□□ -0.98
VPS11-203ENST00000529545 TOX3O15405 576 aaPredicted RBP8.9□□□□□ -0.98
VPS11-203ENST00000529545 SEMA7AO75326 666 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 RASSF9O75901 435 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 KIAA0754O94854 1291 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 NDUFA10O95299 355 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 PGLSO95336 258 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 EML2O95834 649 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 FURINP09958 794 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 F3P13726 295 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 ZNF30P17039 623 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 AMD1P17707 334 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 CTPS1P17812 591 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 GARSP41250 739 aaKnown RBP8.9□□□□□ -0.98
VPS11-203ENST00000529545 ZNF135P52742 658 aaPredicted RBP8.9□□□□□ -0.98
VPS11-203ENST00000529545 RPL7AP62424 266 aaKnown RBP8.9□□□□□ -0.98
VPS11-203ENST00000529545 SEMA5AQ13591 1074 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 PPP6R3Q5H9R7 873 aaPredicted RBP8.9□□□□□ -0.98
VPS11-203ENST00000529545 ARHGAP36Q6ZRI8 547 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 MON1BQ7L1V2 547 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 ZNF765Q7L2R6 523 aa8.9□□□□□ -0.98
VPS11-203ENST00000529545 MAMDC2Q7Z304 686 aaPredicted RBP8.9□□□□□ -0.98
VPS11-203ENST00000529545 TSPAN33Q86UF1 283 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms