RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 HLTFQ14527 1009 aaKnown RBP eCLIP12.99□□□□□ -0.33
SSH3-206ENST00000529224 NOMO1Q15155 1222 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 TBC1D25Q3MII6 688 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 PYCR3Q53H96 274 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 SLC30A9Q6PML9 568 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 PID1Q7Z2X4 250 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 TMC3Q7Z5M5 1100 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 TMEM139Q8IV31 216 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 SPC24Q8NBT2 197 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 SNIP1Q8TAD8 396 aaKnown RBP12.99□□□□□ -0.33
SSH3-206ENST00000529224 PTCD2Q8WV60 388 aaKnown RBP12.99□□□□□ -0.33
SSH3-206ENST00000529224 FGF11Q92914 225 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 ATXN7L3BQ96GX2 97 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 ZNF578Q96N58 590 aaPredicted RBP12.99□□□□□ -0.33
SSH3-206ENST00000529224 OSBPL8Q9BZF1 889 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 LRRN3Q9H3W5 708 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 SPATS2LQ9NUQ6 558 aaKnown RBP12.99□□□□□ -0.33
SSH3-206ENST00000529224 UBP1Q9NZI7 540 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 VPS18Q9P253 973 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 LRIT1Q9P2V4 623 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 NFKBIL1Q9UBC1 381 aaPredicted RBP12.99□□□□□ -0.33
SSH3-206ENST00000529224 CNOT6Q9ULM6 557 aaKnown RBP12.99□□□□□ -0.33
SSH3-206ENST00000529224 SHOC2Q9UQ13 582 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 ZNF711Q9Y462 761 aa12.99□□□□□ -0.33
SSH3-206ENST00000529224 FADS2P1A8MWK0 482 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 D6RAR5 112 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 RRP8O43159 456 aaKnown RBP12.98□□□□□ -0.33
SSH3-206ENST00000529224 ZW10O43264 779 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 EPOP01588 193 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 SLC4A1P02730 911 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 FGF1P05230 155 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 ACTR1BP42025 376 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 MAZP56270 477 aaKnown RBP12.98□□□□□ -0.33
SSH3-206ENST00000529224 WNT3AP56704 352 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 ERVPABLB-1P60509 514 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 ACTR1AP61163 376 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 KIF5AQ12840 1032 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 LRP8Q14114 963 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 GSE1Q14687 1217 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 C3orf38Q5JPI3 329 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 ZNF569Q5MCW4 686 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 IGF2-ASQ6U949 168 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 KDELC1Q6UW63 502 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 LRRC69Q6ZNQ3 347 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 MARK2Q7KZI7 788 aaKnown RBP12.98□□□□□ -0.33
SSH3-206ENST00000529224 C17orf82Q86X59 251 aaPredicted RBP12.98□□□□□ -0.33
SSH3-206ENST00000529224 SFTPA2Q8IWL1 248 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 ZNF567Q8N184 647 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 LRRC57Q8N9N7 239 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 EID2BQ96D98 161 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 FCRL5Q96RD9 977 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 ZSCAN5AQ9BUG6 496 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 SPATA16Q9BXB7 569 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 TRABDQ9H4I3 376 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 RMI1Q9H9A7 625 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 AMFRQ9UKV5 643 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 SATB2Q9UPW6 733 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 RNF215Q9Y6U7 377 aa12.98□□□□□ -0.33
SSH3-206ENST00000529224 CFAP46Q8IYW2 2715 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 CCDC187A0A096LP49 1063 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 LOC285095A0A1B0GVY8 99 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 A0A1W2PQM1 296 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 MACROD2A1Z1Q3 448 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 RHPN2P1A8MT19 583 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 DNAJC6O75061 913 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 ZNF189O75820 626 aaPredicted RBP12.97□□□□□ -0.33
SSH3-206ENST00000529224 TJP3O95049 919 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 ATP1A1P05023 1023 aaKnown RBP12.97□□□□□ -0.33
SSH3-206ENST00000529224 RBMS1P29558 406 aaKnown RBP12.97□□□□□ -0.33
SSH3-206ENST00000529224 PDX1P52945 283 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 OTUD4Q01804 1114 aaKnown RBP12.97□□□□□ -0.33
SSH3-206ENST00000529224 MPP3Q13368 585 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 BIRC2Q13490 618 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 ALS2CLQ60I27 953 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 PDPK2PQ6A1A2 396 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 ITPRIPL1Q6GPH6 555 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 PEX26Q7Z412 305 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 ZNF438Q7Z4V0 828 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 SPRED1Q7Z699 444 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 CDKL3Q8IVW4 592 aaPredicted RBP12.97□□□□□ -0.33
SSH3-206ENST00000529224 UBL4BQ8N7F7 174 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 Q8N9G6 341 aaPredicted RBP12.97□□□□□ -0.33
SSH3-206ENST00000529224 WDR36Q8NI36 951 aaKnown RBP12.97□□□□□ -0.33
SSH3-206ENST00000529224 ACTL9Q8TC94 416 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 LIN37Q96GY3 246 aaPredicted RBP12.97□□□□□ -0.33
SSH3-206ENST00000529224 TMEM74Q96NL1 305 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 STRADBQ9C0K7 418 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 PRORYQ9H606 182 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 THSD1Q9NS62 852 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 HACD3Q9P035 362 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 RSPH14Q9UHP6 348 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 ZNHIT2Q9UHR6 403 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 PCDHGA8Q9Y5G5 932 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 ST14Q9Y5Y6 855 aa12.97□□□□□ -0.33
SSH3-206ENST00000529224 OAS3Q9Y6K5 1087 aaKnown RBP12.97□□□□□ -0.33
SSH3-206ENST00000529224 MGAQ8IWI9 3026 aa12.96□□□□□ -0.33
SSH3-206ENST00000529224 A0A1W2PNU3 283 aaPredicted RBP12.96□□□□□ -0.33
SSH3-206ENST00000529224 MIF4GDA9UHW6 222 aaKnown RBP12.96□□□□□ -0.33
SSH3-206ENST00000529224 GPR89AB7ZAQ6 455 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms