RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 IQCGQ9H095 443 aaKnown RBP3.33□□□□□ -1.88
CD44-229ENST00000528672 TSPYL1Q9H0U9 437 aa3.33□□□□□ -1.88
CD44-229ENST00000528672 CDT1Q9H211 546 aa3.33□□□□□ -1.88
CD44-229ENST00000528672 ST6GALNAC4Q9H4F1 302 aa3.33□□□□□ -1.88
CD44-229ENST00000528672 DENND2DQ9H6A0 471 aaPredicted RBP3.33□□□□□ -1.88
CD44-229ENST00000528672 COPS7BQ9H9Q2 264 aaPredicted RBP3.33□□□□□ -1.88
CD44-229ENST00000528672 SLC28A3Q9HAS3 691 aa3.33□□□□□ -1.88
CD44-229ENST00000528672 TRPV5Q9NQA5 729 aa3.33□□□□□ -1.88
CD44-229ENST00000528672 GDE1Q9NZC3 331 aa3.33□□□□□ -1.88
CD44-229ENST00000528672 CWC15Q9P013 229 aaKnown RBP3.33□□□□□ -1.88
CD44-229ENST00000528672 COPG2Q9UBF2 871 aa3.33□□□□□ -1.88
CD44-229ENST00000528672 NDRG3Q9UGV2 375 aa3.33□□□□□ -1.88
CD44-229ENST00000528672 KNSTRNQ9Y448 316 aa3.33□□□□□ -1.88
CD44-229ENST00000528672 SQORQ9Y6N5 450 aa3.33□□□□□ -1.88
CD44-229ENST00000528672 DDX49Q9Y6V7 483 aaKnown RBP3.33□□□□□ -1.88
CD44-229ENST00000528672 DCAF1Q9Y4B6 1507 aa3.33□□□□□ -1.88
CD44-229ENST00000528672 TRBV5-7A0A0A0MS05 114 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 ARHGEF37A1IGU5 675 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 C1orf226A1L170 272 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 INO80B-WBP1J3KQ70 363 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 OGG1O15527 345 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 E2F6O75461 281 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 DAB1O75553 588 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 RECQL5O94762 991 aaPredicted RBP3.32□□□□□ -1.88
CD44-229ENST00000528672 C22orf31O95567 290 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 LATS1O95835 1130 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 FTCDO95954 541 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 TFPIP10646 304 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 SFTPCP11686 197 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 AGAP20933 346 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 CCNCP24863 283 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 CERS1P27544 350 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 HPDP32754 393 aaPredicted RBP3.32□□□□□ -1.88
CD44-229ENST00000528672 MC5RP33032 325 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 KRT2P35908 639 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 PRCPP42785 496 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 CCR10P46092 362 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 TAS2R40P59535 323 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 TUBA4AP68366 448 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 TMF1P82094 1093 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 NAE1Q13564 534 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 ARHGEF6Q15052 776 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 DLG2Q15700 870 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 Q4G0T1 1027 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 FILIP1LQ4L180 1135 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 PLEKHO1Q53GL0 409 aaPredicted RBP3.32□□□□□ -1.88
CD44-229ENST00000528672 SGO1Q5FBB7 561 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 PRAMEF19Q5SWL8 479 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 RARS2Q5T160 578 aaKnown RBP3.32□□□□□ -1.88
CD44-229ENST00000528672 NCAPH2Q6IBW4 605 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 GALNT17Q6IS24 598 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 TRAT1Q6PIZ9 186 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 QSOX2Q6ZRP7 698 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 RBPMS2Q6ZRY4 209 aaKnown RBP3.32□□□□□ -1.88
CD44-229ENST00000528672 RAPH1Q70E73 1250 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 ERN2Q76MJ5 926 aaKnown RBP3.32□□□□□ -1.88
CD44-229ENST00000528672 TAOK1Q7L7X3 1001 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 CAMKMTQ7Z624 323 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 YTHDF3Q7Z739 585 aaKnown RBP3.32□□□□□ -1.88
CD44-229ENST00000528672 CNGA4Q8IV77 575 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 WDR63Q8IWG1 891 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 ZDHHC23Q8IYP9 409 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 ZBTB2Q8N680 514 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 TC2NQ8N9U0 490 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.32□□□□□ -1.88
CD44-229ENST00000528672 MCPH1Q8NEM0 835 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 TSPAN14Q8NG11 270 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 OR8K5Q8NH50 307 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 MGARPQ8TDB4 240 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 LPGAT1Q92604 370 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 ZNF75CPQ92670 426 aaPredicted RBP3.32□□□□□ -1.88
CD44-229ENST00000528672 OTULINQ96BN8 352 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 HDAC11Q96DB2 347 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 RRNAD1Q96FB5 475 aaKnown RBP3.32□□□□□ -1.88
CD44-229ENST00000528672 ZNF419Q96HQ0 510 aaPredicted RBP3.32□□□□□ -1.88
CD44-229ENST00000528672 CEP295NLQ96MC4 621 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 ZNF570Q96NI8 536 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 NUDCD1Q96RS6 583 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 CDRT15Q96T59 188 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 FAM110AQ9BQ89 295 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 PIMREGQ9BSJ6 248 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 SLC7A5P2Q9GIP4 190 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 SPRTNQ9H040 489 aaPredicted RBP3.32□□□□□ -1.88
CD44-229ENST00000528672 MMP27Q9H306 513 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 PAG1Q9NWQ8 432 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 CLIP2Q9UDT6 1046 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 CFAP45Q9UL16 551 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 ERVK-11Q9UQG0 969 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 LAMP3Q9UQV4 416 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 RAP2CQ9Y3L5 183 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 POMT1Q9Y6A1 747 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 A3GALT2U3KPV4 340 aa3.32□□□□□ -1.88
CD44-229ENST00000528672 GPRASP1Q5JY77 1395 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 WDR17Q8IZU2 1322 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 TRAV34A0A0B4J273 112 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 A0A0U1RQF3 1178 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 A0A1W2PR77 199 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 LNP1A1A4G5 178 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 KCNU1A8MYU2 1149 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 FOXO6A8MYZ6 492 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms