RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CLASP2O75122 1294 aaKnown RBP14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 VPS4BO75351 444 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 MOSPD3O75425 235 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 ZNF821O75541 412 aaPredicted RBP14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 PABPC1P11940 636 aaKnown RBP14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 GFAPP14136 432 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 CHRM3P20309 590 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 KCNA5P22460 613 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 EPHA3P29320 983 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 SPAM1P38567 509 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 CCR2P41597 374 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 CPA2P48052 419 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 KCNC1P48547 511 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 ECT2LQ008S8 904 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 CYLC2Q14093 348 aaPredicted RBP14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 CDKN3Q16667 212 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 SETMARQ53H47 684 aaPredicted RBP14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 DGKKQ5KSL6 1271 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 ANKS6Q68DC2 871 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 NXNQ6DKJ4 435 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 C22orf39Q6P5X5 142 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 C16orf89Q6UX73 402 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 TPRG1Q6ZUI0 275 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 USP45Q70EL2 814 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 CHSY3Q70JA7 882 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 KIAA0907Q7Z7F0 614 aaPredicted RBP14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 PIANPQ8IYJ0 282 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 RYBPQ8N488 228 aaPredicted RBP14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 FBXO39Q8N4B4 442 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 CHCHD4Q8N4Q1 142 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 TTC16Q8NEE8 873 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 AGR3Q8TD06 166 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 STMN2Q93045 179 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 BHMTQ93088 406 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 THTPAQ9BU02 230 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 BBS2Q9BXC9 721 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 UNKQ9C0B0 810 aaKnown RBP14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 CLPBQ9H078 707 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 CD248Q9HCU0 757 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 BPIFA1Q9NP55 256 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 SPHK2Q9NRA0 654 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 PLK2Q9NYY3 685 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 KLHL42Q9P2K6 505 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 CLEC4EQ9ULY5 219 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 SLC8A2Q9UPR5 921 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 FAM50BQ9Y247 325 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 MED16Q9Y2X0 877 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 C1orf232A0A0U1RR37 186 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 LINC01553A4QN01 128 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 WASH3PC4AMC7 463 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 SDHDO14521 159 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 PEX11AO75192 247 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 GPC4O75487 556 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 MLYCDO95822 493 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 MTHFD2P13995 350 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 HNRNPLP14866 589 aaKnown RBP eCLIP14.66□□□□□ -0.061e-9■□□□□ 8.8
ECHDC1-220ENST00000528402 CTPS1P17812 591 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 PIK3R1P27986 724 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 HLA-FP30511 346 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 GCKP35557 465 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 HNF1BP35680 557 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 NNMTP40261 264 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 RECQLP46063 649 aaPredicted RBP14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 RGS4P49798 205 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 ATP4BP51164 291 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 OR4D1Q15615 310 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 ZNF77Q15935 545 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 PRSS36Q5K4E3 855 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 TMEM25Q86YD3 366 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 ULK2Q8IYT8 1036 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 AHI1Q8N157 1196 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 PTGR2Q8N8N7 351 aaPredicted RBP14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 SERPINI1Q99574 410 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 CCT7Q99832 543 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 WDR55Q9H6Y2 383 aaPredicted RBP14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 EBF2Q9HAK2 575 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 HCFC1R1Q9NWW0 138 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 PRPF19Q9UMS4 504 aaKnown RBP14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 CEP350Q5VT06 3117 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 ZNF106Q9H2Y7 1883 aaKnown RBP14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 GLYATL1P3A0A0U1RQE8 302 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 HSPA1AP0DMV8 641 aaKnown RBP14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 HSPA1BP0DMV9 641 aaKnown RBP14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 CCR10P46092 362 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 CDKN1CP49918 316 aaPredicted RBP14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 LBX1P52954 281 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 NFATC2Q13469 925 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 SQLEQ14534 574 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 PDCD2Q16342 344 aaPredicted RBP14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 PFKFB4Q16877 469 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 FUT11Q495W5 492 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 PREPLQ4J6C6 727 aaPredicted RBP14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 CTSL3PQ5NE16 218 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 PTRHD1Q6GMV3 140 aaKnown RBP14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 SERPINA9Q86WD7 417 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 PHTF2Q8N3S3 785 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 CD200R1Q8TD46 325 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 DTX3LQ8TDB6 740 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 HCAR2Q8TDS4 363 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 ULK4Q96C45 1275 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms