RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 PPM1FP49593 454 aaPredicted RBP15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 TPM4P67936 248 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 ZBTB17Q13105 803 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 CLPPQ16740 277 aaPredicted RBP15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 ZFYVE27Q5T4F4 411 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 TMEM71Q6P5X7 295 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 B4GALNT4Q76KP1 1039 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 CCDC13Q8IYE1 715 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 SFRP1Q8N474 314 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 AGBL5Q8NDL9 886 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 FATE1Q969F0 183 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 NKD1Q969G9 470 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 SLC38A3Q99624 504 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 ARHGAP9Q9BRR9 750 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 CEP41Q9BYV8 373 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 FAM83DQ9H4H8 585 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 SLC39A1Q9NY26 324 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 DTLQ9NZJ0 730 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 TBC1D29Q9UFV1 150 aa15.4■□□□□ 0.06
CLNS1A-210ENST00000528364 EFCAB7A8K855 629 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 SNX2O60749 519 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 ACP5P13686 325 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 ITGB6P18564 788 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 CSTF2P33240 577 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 NFATC2Q13469 925 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 TRA2AQ13595 282 aaKnown RBP eCLIP15.39■□□□□ 0.054e-8■□□□□ 9.8
CLNS1A-210ENST00000528364 PEX6Q13608 980 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 MESDQ14696 234 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 IYDQ6PHW0 289 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 MAP7D3Q8IWC1 876 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 RNF157Q96PX1 679 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 LYSMD1Q96S90 227 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 MLPHQ9BV36 600 aaPredicted RBP15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 B3GNT4Q9C0J1 378 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 BRD8Q9H0E9 1235 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 AMACRQ9UHK6 382 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 PCDHGA3Q9Y5H0 932 aa15.39■□□□□ 0.05
CLNS1A-210ENST00000528364 MYO18BQ8IUG5 2567 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 ANKRD66B4E2M5 251 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 STMND1H3BQB6 276 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 ITGB2P05107 769 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 PYGLP06737 847 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 KRT7P08729 469 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 H2AFZP0C0S5 128 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 PIRTP0C851 137 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 MX2P20592 715 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 CD82P27701 267 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 UGT1A3P35503 534 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 FASLGP48023 281 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 RPL26P61254 145 aaKnown RBP15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 LRP8Q14114 963 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 GALNT3Q14435 633 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 CLCA4Q14CN2 919 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 ASTE1Q2TB18 679 aaPredicted RBP15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 HENMT1Q5T8I9 393 aaKnown RBP15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 ANKS6Q68DC2 871 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 NPNTQ6UXI9 565 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 H2AFVQ71UI9 128 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 LYSMD3Q7Z3D4 306 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 PRICKLE2Q7Z3G6 844 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 FAM129CQ86XR2 697 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 PLD5Q8N7P1 536 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 ZSCAN1Q8NBB4 408 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 NCSTNQ92542 709 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 HDAC11Q96DB2 347 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 AHCYL2Q96HN2 611 aaKnown RBP15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 CTRCQ99895 268 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 SLC12A9Q9BXP2 914 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 XPO4Q9C0E2 1151 aaKnown RBP15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 PDP2Q9P2J9 529 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 UVRAGQ9P2Y5 699 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 ATXN10Q9UBB4 475 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 RPL26L1Q9UNX3 145 aaKnown RBP15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 SHOC2Q9UQ13 582 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 HEY1Q9Y5J3 304 aa15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 ASH1LQ9NR48 2969 aaKnown RBP15.38■□□□□ 0.05
CLNS1A-210ENST00000528364 LRRD1A4D1F6 860 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 C3orf70A6NLC5 250 aaPredicted RBP15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 GOLGA6L19H0YKK7 550 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 ZNF8P17098 575 aaPredicted RBP15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 CA4P22748 312 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 HNRNPH3P31942 346 aaKnown RBP15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 MAPK9P45984 424 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 HHEXQ03014 270 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 PPIDQ08752 370 aaKnown RBP15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 SLC18A3Q16572 532 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 ALS2CLQ60I27 953 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 BMPERQ8N8U9 685 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 GPR26Q8NDV2 337 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 OR10G6Q8NH81 332 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 CTNNBL1Q8WYA6 563 aaPredicted RBP15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 IQCDQ96DY2 449 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 RNF31Q96EP0 1072 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 TRIM4Q9C037 500 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 ZMYND15Q9H091 742 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 OR2AG1Q9H205 316 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 PRDM8Q9NQV8 689 aa15.37■□□□□ 0.05
CLNS1A-210ENST00000528364 STARD5Q9NSY2 213 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms