RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 USP17L23D6RBM5 183 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 PAPSS2O95340 614 aaPredicted RBP5.88□□□□□ -1.47
PCF11-202ENST00000528336 APOA4P06727 396 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 HOXD13P35453 343 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 GABRB2P47870 512 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 PDLIM4P50479 330 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 ZXDBP98169 803 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 DDR1Q08345 913 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 CUL4AQ13619 759 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 BECN1Q14457 450 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 KRT32Q14532 448 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 COL28A1Q2UY09 1125 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 PARP10Q53GL7 1025 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 ARMC4Q5T2S8 1044 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 HIST2H2BCQ6DN03 193 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 HIST2H2BDQ6DRA6 164 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 UNC5DQ6UXZ4 953 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 B3GNT6Q6ZMB0 384 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 HAPLN4Q86UW8 402 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 IQCA1Q86XH1 822 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 DIS3L2Q8IYB7 885 aaKnown RBP5.88□□□□□ -1.47
PCF11-202ENST00000528336 ZBTB2Q8N680 514 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 NAT8LQ8N9F0 302 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 FAM216AQ8WUB2 273 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 WASF1Q92558 559 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 TIGD1Q96MW7 591 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 PI4K2AQ9BTU6 479 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 C2orf40Q9H1Z8 148 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 RRP7BPQ9NSQ0 103 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 RCOR1Q9UKL0 485 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 MKLN1Q9UL63 735 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 CDC14AQ9UNH5 594 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 KNSTRNQ9Y448 316 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 CAPN7Q9Y6W3 813 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 ERBINQ96RT1 1412 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 DUOX2Q9NRD8 1548 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 ADGBQ8N7X0 1667 aa5.88□□□□□ -1.47
PCF11-202ENST00000528336 IGLV5-52A0A0A0MRZ9 124 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 TGFB1I1O43294 461 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 SLC28A2O43868 658 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 STARD3NLO95772 234 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 SPARCP09486 303 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 ZNF12P17014 697 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 CHATP28329 748 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 RARSP54136 660 aaKnown RBP5.87□□□□□ -1.47
PCF11-202ENST00000528336 DSCR9P59020 149 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 C2orf68Q2NKX9 166 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 CDC73Q6P1J9 531 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 MFSD6Q6ZSS7 791 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 CPLX4Q7Z7G2 160 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 SCCPDHQ8NBX0 429 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 BEST2Q8NFU1 509 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 HUS1BQ8NHY5 278 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 CREB3L4Q8TEY5 395 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 GTF3C6Q969F1 213 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 BRF2Q9HAW0 419 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 SLC6A13Q9NSD5 602 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 DIAPH3Q9NSV4 1193 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 SLC9A2Q9UBY0 812 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 TBK1Q9UHD2 729 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 VPS28Q9UK41 221 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 ZHX1Q9UKY1 873 aaPredicted RBP5.87□□□□□ -1.47
PCF11-202ENST00000528336 INTS6Q9UL03 887 aaKnown RBP5.87□□□□□ -1.47
PCF11-202ENST00000528336 RABL2BQ9UNT1 228 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 ZNF711Q9Y462 761 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 ATP6V0A2Q9Y487 856 aa5.87□□□□□ -1.47
PCF11-202ENST00000528336 SIGLEC1Q9BZZ2 1709 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 ANKRD50Q9ULJ7 1429 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 CLEC18AA5D8T8 446 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 NPIPB15A6NHN6 443 aaPredicted RBP5.86□□□□□ -1.47
PCF11-202ENST00000528336 EIF3CLB5ME19 914 aaKnown RBP5.86□□□□□ -1.47
PCF11-202ENST00000528336 RTCAO00442 366 aaKnown RBP5.86□□□□□ -1.47
PCF11-202ENST00000528336 G6PDP11413 515 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 STMN1P16949 149 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 CD58P19256 250 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 SSTR2P30874 369 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 ICAM3P32942 547 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 RGS2P41220 211 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 TNNT3P45378 269 aaPredicted RBP5.86□□□□□ -1.47
PCF11-202ENST00000528336 TMEM115Q12893 351 aaPredicted RBP5.86□□□□□ -1.47
PCF11-202ENST00000528336 FGFBP1Q14512 234 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 ALG11Q2TAA5 492 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 MEPCEQ7L2J0 689 aaKnown RBP5.86□□□□□ -1.47
PCF11-202ENST00000528336 MCM10Q7L590 875 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 LINGO2Q7L985 606 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 PGBD5Q8N414 524 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 CLEC18CQ8NCF0 446 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 AGBL3Q8NEM8 1001 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 N4BP2L2Q92802 583 aaPredicted RBP5.86□□□□□ -1.47
PCF11-202ENST00000528336 SPATA17Q96L03 361 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 JAKMIP1Q96N16 626 aaKnown RBP5.86□□□□□ -1.47
PCF11-202ENST00000528336 EDEM3Q9BZQ6 932 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 TM6SF1Q9BZW5 370 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 RANBP17Q9H2T7 1088 aaKnown RBP5.86□□□□□ -1.47
PCF11-202ENST00000528336 KIF9Q9HAQ2 790 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 GPR108Q9NPR9 543 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 HAO1Q9UJM8 370 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 SNX9Q9Y5X1 595 aa5.86□□□□□ -1.47
PCF11-202ENST00000528336 BCORL1Q5H9F3 1711 aa5.85□□□□□ -1.47
PCF11-202ENST00000528336 EIF2AK4Q9P2K8 1649 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms