RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 LRRK2Q5S007 2527 aa11.52□□□□□ -0.56
CCDC90B-210ENST00000528149 POM121BA6NF01 834 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 AURKAO14965 403 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 SCAMP1O15126 338 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 SEC31AO94979 1220 aaKnown RBP11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 CLDN7O95471 211 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 CER1O95813 267 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 TPH1P17752 444 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 IGFALSP35858 605 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 CTSKP43235 329 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 MAGEA6P43360 314 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 CCR5P51681 352 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 STC1P52823 247 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 CLDN6P56747 220 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 RPS21P63220 83 aaKnown RBP11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 TLE3Q04726 772 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 ACOX1Q15067 660 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 TCEA2Q15560 299 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 GLT6D1Q7Z4J2 308 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 HSD11B1LQ7Z5J1 315 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 LINC00523Q86TU6 105 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 GATAD2AQ86YP4 633 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 PPIL6Q8IXY8 311 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 SLC22A18ASQ8N1D0 253 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 TTC30BQ8N4P2 665 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 DNAAF3Q8N9W5 541 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 OR13H1Q8NG92 308 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 SNIP1Q8TAD8 396 aaKnown RBP11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 SNF8Q96H20 258 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 LYSMD1Q96S90 227 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 KLF6Q99612 283 aaPredicted RBP11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 LRRC1Q9BTT6 524 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 GPR63Q9BZJ6 419 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 CASS4Q9NQ75 786 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 TPX2Q9ULW0 747 aaKnown RBP11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 ANKRD6Q9Y2G4 727 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 SNX24Q9Y343 169 aa11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 ANKRD17O75179 2603 aaKnown RBP11.52□□□□□ -0.57
CCDC90B-210ENST00000528149 FLNCQ14315 2725 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 ESYT3A0FGR9 886 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 CCDC78A2IDD5 438 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 TNFSF14O43557 240 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 BUD23O43709 281 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 LZTS3O60299 673 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 SDC3O75056 442 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 TM7SF2O76062 418 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 PAK4O96013 591 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 NTRK1P04629 796 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 ZNF30P17039 623 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 ITGA8P53708 1063 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 SESN2P58004 480 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 CRADDP78560 199 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 CDH17Q12864 832 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 LY6DQ14210 128 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 POU6F1Q14863 301 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 CDKN3Q16667 212 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 HLA-BQ31612 363 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 CCDC38Q502W7 563 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 SETMARQ53H47 684 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 ZNF542PQ5EBM4 170 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 TEX35Q5T0J7 233 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 CERCAMQ5T4B2 595 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 NEK5Q6P3R8 708 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 DBX2Q6ZNG2 339 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 NAT8LQ8N9F0 302 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 EID2BQ96D98 161 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 BMFQ96LC9 184 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 COQ10AQ96MF6 247 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 ERP44Q9BS26 406 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 RAB17Q9H0T7 212 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 PCED1AQ9H1Q7 454 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 ZFYVE1Q9HBF4 777 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 ARNT2Q9HBZ2 717 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 MAGEE1Q9HCI5 957 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 CD84Q9UIB8 345 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 UTP11Q9Y3A2 253 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 KCTD3Q9Y597 815 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 ARL5AQ9Y689 179 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 AK5Q9Y6K8 562 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 AHCTF1Q8WYP5 2266 aa11.51□□□□□ -0.57
CCDC90B-210ENST00000528149 AVILO75366 819 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 BANF1O75531 89 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 RECQL5O94762 991 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 MYF5P13349 255 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 MGAT1P26572 445 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 ETV3P41162 512 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 CDK16Q00536 496 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 PTSQ03393 145 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 MSLNQ13421 630 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 PTPRCAPQ14761 206 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 IRF4Q15306 451 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 TRADDQ15628 312 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 COLEC12Q5KU26 742 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 ALS2CLQ60I27 953 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 DUPD1Q68J44 220 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 HIBCHQ6NVY1 386 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 Q6ZVL8 140 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 CAND1Q86VP6 1230 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 TMPRSS12Q86WS5 348 aa11.5□□□□□ -0.57
CCDC90B-210ENST00000528149 SPACA3Q8IXA5 215 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms