RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 PDE2AO00408 941 aaPredicted RBP10.48□□□□□ -0.73
CPSF1-203ENST00000527916 MATN3O15232 486 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 DUX1O43812 170 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 PRKCGP05129 697 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 CD48P09326 243 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 TPM1P09493 284 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 TMEM253P0C7T8 217 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 GM2AP17900 193 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 GNLYP22749 145 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 CCNCP24863 283 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 CD1CP29017 333 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 OAS2P29728 719 aaKnown RBP10.48□□□□□ -0.73
CPSF1-203ENST00000527916 VIPR1P32241 457 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 GARSP41250 739 aaKnown RBP10.48□□□□□ -0.73
CPSF1-203ENST00000527916 ARHGAP25P42331 645 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 SSR1P43307 286 aaKnown RBP10.48□□□□□ -0.73
CPSF1-203ENST00000527916 MAZP56270 477 aaKnown RBP10.48□□□□□ -0.73
CPSF1-203ENST00000527916 ABHD18Q0P651 414 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 GALNT2Q10471 571 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 MMRN1Q13201 1228 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 DPYSL3Q14195 570 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 NR1D2Q14995 579 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 IFI16Q16666 785 aaKnown RBP10.48□□□□□ -0.73
CPSF1-203ENST00000527916 ATP13A4Q4VNC1 1196 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 ANKRD20A8PQ5CZ79 823 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 NCBP2-AS2Q69YL0 99 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 ALG1LQ6GMV1 187 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 CAPRIN2Q6IMN6 1127 aaKnown RBP10.48□□□□□ -0.73
CPSF1-203ENST00000527916 PNCKQ6P2M8 343 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 C16orf46Q6P387 395 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 ASB18Q6ZVZ8 466 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 VSIG1Q86XK7 387 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 SFTPA2Q8IWL1 248 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 CCDC13Q8IYE1 715 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 NDUFAF2Q8N183 169 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 PAF1Q8N7H5 531 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 KCTD6Q8NC69 237 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 PLA2G15Q8NCC3 412 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 ZDHHC1Q8WTX9 485 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 STARD8Q92502 1023 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 COQ10AQ96MF6 247 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 GSDMCQ9BYG8 508 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 NOD2Q9HC29 1040 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 CYP4F12Q9HCS2 524 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 FGF22Q9HCT0 170 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 HAUS2Q9NVX0 235 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 MOSPD1Q9UJG1 213 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 PCDHB3Q9Y5E6 796 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 PCDHGC4Q9Y5F7 938 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 A1L4Q6 167 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 TTC24A2A3L6 582 aaPredicted RBP10.47□□□□□ -0.73
CPSF1-203ENST00000527916 TTLL8A6PVC2 850 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 FZD6O60353 706 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 HEXIM1O94992 359 aaKnown RBP10.47□□□□□ -0.73
CPSF1-203ENST00000527916 PGLSO95336 258 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 DDAH2O95865 285 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 CPP00450 1065 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 THRAP10827 490 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 CYP2A6P11509 494 aaPredicted RBP10.47□□□□□ -0.73
CPSF1-203ENST00000527916 CCNB1P14635 433 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 MX2P20592 715 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 TEAD1P28347 426 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 UQCRFS1P47985 274 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 PPM1FP49593 454 aaPredicted RBP10.47□□□□□ -0.73
CPSF1-203ENST00000527916 ILF3Q12906 894 aaKnown RBP eCLIP10.47□□□□□ -0.73
CPSF1-203ENST00000527916 SQSTM1Q13501 440 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 ARMC12Q5T9G4 340 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 ANKS6Q68DC2 871 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 KCTD16Q68DU8 428 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 CEACAM20Q6UY09 585 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 NYAP1Q6ZVC0 841 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 NLRP8Q86W28 1048 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 C17orf82Q86X59 251 aaPredicted RBP10.47□□□□□ -0.73
CPSF1-203ENST00000527916 VSTM4Q8IW00 320 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 RAVER1Q8IY67 606 aaKnown RBP10.47□□□□□ -0.73
CPSF1-203ENST00000527916 PIH1D2Q8WWB5 315 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 FUBP1Q96AE4 644 aaKnown RBP10.47□□□□□ -0.73
CPSF1-203ENST00000527916 MCCC1Q96RQ3 725 aaPredicted RBP10.47□□□□□ -0.73
CPSF1-203ENST00000527916 POLR1EQ9GZS1 481 aaKnown RBP10.47□□□□□ -0.73
CPSF1-203ENST00000527916 TSPY26PQ9H489 355 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 DEF6Q9H4E7 631 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 MRPL40Q9NQ50 206 aaKnown RBP10.47□□□□□ -0.73
CPSF1-203ENST00000527916 ABHD10Q9NUJ1 306 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 SPATS2LQ9NUQ6 558 aaKnown RBP10.47□□□□□ -0.73
CPSF1-203ENST00000527916 B4GALT6Q9UBX8 382 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 SRPK3Q9UPE1 567 aa10.47□□□□□ -0.73
CPSF1-203ENST00000527916 LOC101059948A0A1B0GTJ6 334 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 AKR1B10O60218 316 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 MTA2O94776 668 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 ECEL1O95672 775 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 FGF1P05230 155 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 KDELR1P24390 212 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 RIPPLY3P57055 190 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 TAS2R40P59535 323 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 MAXP61244 160 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 GPLD1P80108 840 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 DPTQ07507 201 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 TRAF2Q12933 501 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 ACOX1Q15067 660 aa10.46□□□□□ -0.73
CPSF1-203ENST00000527916 TCEAL1Q15170 157 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms