RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 MINDY1Q8N5J2 469 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 NSUN6Q8TEA1 469 aaKnown RBP12.45□□□□□ -0.42
TSKU-203ENST00000527881 ITCHQ96J02 903 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 ZNF717Q9BY31 904 aaPredicted RBP12.45□□□□□ -0.42
TSKU-203ENST00000527881 DCSTAMPQ9H295 470 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 NECTIN3Q9NQS3 549 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 NSMCE4AQ9NXX6 385 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 MAGEB16A2A368 324 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 KRT87PA6NCN2 255 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 EFCAB9A8MZ26 197 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 ZBTB24O43167 697 aaPredicted RBP12.44□□□□□ -0.42
TSKU-203ENST00000527881 ZW10O43264 779 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 LINC00032P0C843 101 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 ITGB6P18564 788 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 PIGAP37287 484 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 P2RX3P56373 397 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 TOP3AQ13472 1001 aaPredicted RBP12.44□□□□□ -0.42
TSKU-203ENST00000527881 GRB7Q14451 532 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 SYT16Q17RD7 645 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 HPDLQ96IR7 371 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 NUAK2Q9H093 628 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 GBA2Q9HCG7 927 aaPredicted RBP12.44□□□□□ -0.42
TSKU-203ENST00000527881 SBF2Q86WG5 1849 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 ZFC3H1O60293 1989 aaKnown RBP12.44□□□□□ -0.42
TSKU-203ENST00000527881 A0A087WZ62 844 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 TMCC2O75069 709 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 PGLSO95336 258 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 CST1P01037 141 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 PIGRP01833 764 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 KRT6AP02538 564 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 KRT6BP04259 564 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 ALPLP05186 524 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 UMPSP11172 480 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 NOL9Q5SY16 702 aaKnown RBP12.44□□□□□ -0.42
TSKU-203ENST00000527881 AGAP9Q5VTM2 703 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 AGAP6Q5VW22 663 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 BTBD8Q5XKL5 378 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 ANKRD34AQ69YU3 496 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 FAM196AQ6ZSG2 479 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 GALNT5Q7Z7M9 940 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 SLC7A14Q8TBB6 771 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 STON2Q8WXE9 905 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 AGAP4Q96P64 663 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 NT5C1AQ9BXI3 368 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 ALG9Q9H6U8 611 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 MID1IP1Q9NPA3 183 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 EIF3LQ9Y262 564 aaKnown RBP12.44□□□□□ -0.42
TSKU-203ENST00000527881 PTPRFP10586 1907 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 LOC100506127A0A0U1RQW1 187 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 A0A1W2PQ72 361 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 SCO2O43819 266 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 IFI30P13284 250 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 CHRNEQ04844 493 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 ZNF181Q2M3W8 571 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 CCDC28AQ8IWP9 274 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 SLC22A15Q8IZD6 547 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 LRRC71Q8N4P6 559 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 RNF139Q8WU17 664 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 PHF10Q8WUB8 498 aaKnown RBP12.44□□□□□ -0.42
TSKU-203ENST00000527881 CCDC126Q96EE4 140 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 TOR4AQ9NXH8 423 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 SCN3BQ9NY72 215 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 BTBD3Q9Y2F9 522 aa12.44□□□□□ -0.42
TSKU-203ENST00000527881 FXYD1O00168 92 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 TSPAN9O75954 239 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 MED26O95402 600 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 CD36P16671 472 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 NFKB1P19838 968 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 ADORA2BP29275 332 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 KRR1Q13601 381 aaKnown RBP12.43□□□□□ -0.42
TSKU-203ENST00000527881 NPTX1Q15818 432 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 ZNF404Q494X3 552 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 FAM182BQ5T319 152 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 SLX4IPQ5VYV7 408 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 ARHGAP36Q6ZRI8 547 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 HORMAD1Q86X24 394 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 TMEM192Q8IY95 271 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 C1orf127Q8N9H9 656 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 DYNC2LI1Q8TCX1 351 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 CEP19Q96LK0 163 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 PRRG3Q9BZD7 231 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 PRDM8Q9NQV8 689 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 ABCD2Q9UBJ2 740 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 FAM25AB3EWG3 89 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 FAM25CB3EWG5 89 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 FAM25GB3EWG6 89 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 PIP5K1BO14986 540 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 STBD1O95210 358 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 PTTG1O95997 202 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 SULT1E1P49888 294 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 OR4D2P58180 307 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 DGKZQ13574 1117 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 CDK10Q15131 360 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 PPP1R26Q5T8A7 1209 aaPredicted RBP12.43□□□□□ -0.42
TSKU-203ENST00000527881 CYP20A1Q6UW02 462 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 ZPBP2Q6X784 338 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 NEK10Q6ZWH5 1172 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 RBM23Q86U06 439 aaKnown RBP12.43□□□□□ -0.42
TSKU-203ENST00000527881 METTL4Q8N3J2 472 aa12.43□□□□□ -0.42
TSKU-203ENST00000527881 ZNF540Q8NDQ6 660 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms