RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SCIMPQ6UWF3 145 aa15□□□□□ -0.01
USP47-207ENST00000527733 GALNT4Q8N4A0 578 aa15□□□□□ -0.01
USP47-207ENST00000527733 NAF1Q96HR8 494 aaKnown RBP15□□□□□ -0.01
USP47-207ENST00000527733 C12orf65Q9H3J6 166 aaKnown RBP15□□□□□ -0.01
USP47-207ENST00000527733 EBF3Q9H4W6 596 aa15□□□□□ -0.01
USP47-207ENST00000527733 TMEM216Q9P0N5 145 aa15□□□□□ -0.01
USP47-207ENST00000527733 IL36AQ9UHA7 158 aa15□□□□□ -0.01
USP47-207ENST00000527733 ISM1B1AKI9 464 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 SLC28A1O00337 649 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 ZSCAN9O15535 394 aaPredicted RBP14.99□□□□□ -0.01
USP47-207ENST00000527733 PROCP04070 461 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 CA3P07451 260 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 SQLEQ14534 574 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 RAB6CQ53S08 254 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 CAPN13Q6MZZ7 669 aaPredicted RBP14.99□□□□□ -0.01
USP47-207ENST00000527733 PHC3Q8NDX5 983 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 KCTD14Q9BQ13 255 aaPredicted RBP14.99□□□□□ -0.01
USP47-207ENST00000527733 RAB6CQ9H0N0 254 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 CHCHD3Q9NX63 227 aaKnown RBP14.99□□□□□ -0.01
USP47-207ENST00000527733 GJA8P48165 433 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 ZYG11AQ6WRX3 759 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 LYSMD3Q7Z3D4 306 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 BANPQ8N9N5 519 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 ZMIZ2Q8NF64 920 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 SIGLEC10Q96LC7 697 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 PSKH2Q96QS6 385 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 OGDHLQ9ULD0 1010 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 WNT9AO14904 365 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 FKBP6O75344 327 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 ALPIP09923 528 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 ME2P23368 584 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 RPIAP49247 311 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 RPL26P61254 145 aaKnown RBP14.99□□□□□ -0.01
USP47-207ENST00000527733 MSS51Q4VC12 460 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 SAMD4BQ5PRF9 694 aaKnown RBP14.99□□□□□ -0.01
USP47-207ENST00000527733 SCD5Q86SK9 330 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 CPNE9Q8IYJ1 553 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 HDDC3Q8N4P3 179 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 ZNF655Q8N720 491 aaPredicted RBP14.99□□□□□ -0.01
USP47-207ENST00000527733 ZNF366Q8N895 744 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 PHOSPHO2Q8TCD6 241 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 MMADHCQ9H3L0 296 aaPredicted RBP14.99□□□□□ -0.01
USP47-207ENST00000527733 SPHK2Q9NRA0 654 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 STX18Q9P2W9 335 aaKnown RBP14.99□□□□□ -0.01
USP47-207ENST00000527733 RPL26L1Q9UNX3 145 aaKnown RBP14.99□□□□□ -0.01
USP47-207ENST00000527733 ANKRD31Q8N7Z5 1873 aa14.99□□□□□ -0.01
USP47-207ENST00000527733 OR51F1A6NGY5 319 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 FAM159BA6NKW6 160 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 PCCBP05166 539 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 DLDP09622 509 aaKnown RBP14.98□□□□□ -0.01
USP47-207ENST00000527733 FBXW4P57775 412 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 LDLRAP1Q5SW96 308 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 CYP4X1Q8N118 509 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 FSTL5Q8N475 847 aaPredicted RBP14.98□□□□□ -0.01
USP47-207ENST00000527733 KCNN1Q92952 543 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 BBS4Q96RK4 519 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 CDRT15Q96T59 188 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 NUDT4Q9NZJ9 180 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 TRPC4Q9UBN4 977 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 SBF2Q86WG5 1849 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 EDDM13A0A1B0GTR0 161 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 TTC36A6NLP5 189 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 SLC31A1O15431 190 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 UGT1A9O60656 530 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 BMP10O95393 424 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 PRKCGP05129 697 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 ABCB1P08183 1280 aaPredicted RBP14.98□□□□□ -0.01
USP47-207ENST00000527733 COX7A2P14406 83 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 NCALDP61601 193 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 DSC1Q08554 894 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 GALNT13Q8IUC8 556 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 MMAAQ8IVH4 418 aaKnown RBP14.98□□□□□ -0.01
USP47-207ENST00000527733 DNAJC9Q8WXX5 260 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 C7orf26Q96N11 449 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 FEM1AQ9BSK4 669 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 UGT1A7Q9HAW7 530 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 UGT1A10Q9HAW8 530 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 UGT1A8Q9HAW9 530 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 CSNK1G1Q9HCP0 422 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 WARS2Q9UGM6 360 aaKnown RBP14.98□□□□□ -0.01
USP47-207ENST00000527733 SNX8Q9Y5X2 465 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 FAM155AB1AL88 458 aaPredicted RBP14.98□□□□□ -0.01
USP47-207ENST00000527733 FANCGO15287 622 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 SERPINA6P08185 405 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 VHLP40337 213 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 SLC10A2Q12908 348 aaPredicted RBP14.98□□□□□ -0.01
USP47-207ENST00000527733 SLC8B1Q6J4K2 584 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 TMEM220Q6QAJ8 160 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 CFAP206Q8IYR0 622 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 UNC5BQ8IZJ1 945 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 VPS50Q96JG6 964 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 NSMCE2Q96MF7 247 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 ACAT2Q9BWD1 397 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 DNAJC11Q9NVH1 559 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 COL11A2P13942 1736 aaPredicted RBP14.98□□□□□ -0.01
USP47-207ENST00000527733 TK2O00142 265 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 FAM189A1O60320 539 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 SNRPB2P08579 225 aaKnown RBP14.98□□□□□ -0.01
USP47-207ENST00000527733 CREB1P16220 341 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 PPP2R1BP30154 601 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms