RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 PEX11BO96011 259 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 SOD1P00441 154 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 TPM1P09493 284 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 CCDC172P0C7W6 258 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 ATXN8OSP0DMR3 200 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 FERP16591 822 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 AMD1P17707 334 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 GJC1P36383 396 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 DLSTP36957 453 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 ARL4AP40617 200 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 MMP13P45452 471 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 NOP2P46087 812 aaKnown RBP6.52□□□□□ -1.37
CD44-221ENST00000526000 UQCRFS1P47985 274 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 AIF1P55008 147 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 GFERP55789 205 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 GSCP56915 257 aaPredicted RBP6.52□□□□□ -1.37
CD44-221ENST00000526000 DPYSQ14117 519 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 RFTN1Q14699 578 aaPredicted RBP6.52□□□□□ -1.37
CD44-221ENST00000526000 NR1D2Q14995 579 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 PLA2G4EQ3MJ16 856 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 ATP13A4Q4VNC1 1196 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 LACTB2Q53H82 288 aaPredicted RBP6.52□□□□□ -1.37
CD44-221ENST00000526000 PLEKHA7Q6IQ23 1121 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 IYDQ6PHW0 289 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 TMCO3Q6UWJ1 677 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 CEACAM20Q6UY09 585 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 CYP4V2Q6ZWL3 525 aaPredicted RBP6.52□□□□□ -1.37
CD44-221ENST00000526000 USP45Q70EL2 814 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 ARHGAP22Q7Z5H3 698 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 GAS2L3Q86XJ1 694 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 RASGRP3Q8IV61 690 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 BBS5Q8N3I7 341 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 LZTR1Q8N653 840 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 BMPERQ8N8U9 685 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 GALNT6Q8NCL4 622 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 NSMCE1Q8WV22 266 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 CATSPER2Q96P56 530 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 TGM7Q96PF1 710 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 TRIM5Q9C035 493 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 B3GNT4Q9C0J1 378 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 OSGEPL1Q9H4B0 414 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 DTLQ9NZJ0 730 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 SCHIP1Q9P0W5 487 aaPredicted RBP6.52□□□□□ -1.37
CD44-221ENST00000526000 ANAPC2Q9UJX6 822 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 DNAJC16Q9Y2G8 782 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 SLC30A1Q9Y6M5 507 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 RPS6KL1Q9Y6S9 549 aa6.52□□□□□ -1.37
CD44-221ENST00000526000 A1L4Q6 167 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 TTLL8A6PVC2 850 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 GOLGA6L6A8MZA4 724 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 DDX3XO00571 662 aaKnown RBP eCLIP6.51□□□□□ -1.37
CD44-221ENST00000526000 DDX3YO15523 660 aaKnown RBP6.51□□□□□ -1.37
CD44-221ENST00000526000 DNAJC6O75061 913 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 SOCS5O75159 536 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 LRCH4O75427 683 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 RASSF9O75901 435 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 DNAJB5O75953 348 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 KIAA0754O94854 1291 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 SLC4A1P02730 911 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 PIRTP0C851 137 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 RARAP10276 462 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 GNLYP22749 145 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 COL8A1P27658 744 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 CDC25BP30305 580 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 HTR7P34969 479 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 PBX1P40424 430 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 LEPRP48357 1165 aaKnown RBP6.51□□□□□ -1.37
CD44-221ENST00000526000 HCAR3P49019 387 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 CCL11P51671 97 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 GPLD1P80108 840 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 NIPAL4Q0D2K0 466 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 CHAF1BQ13112 559 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 SQSTM1Q13501 440 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 SEPT6Q14141 434 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 SEPT7Q16181 437 aaKnown RBP6.51□□□□□ -1.37
CD44-221ENST00000526000 ASIC2Q16515 512 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 CLPPQ16740 277 aaPredicted RBP6.51□□□□□ -1.37
CD44-221ENST00000526000 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.51□□□□□ -1.37
CD44-221ENST00000526000 ALS2CLQ60I27 953 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 FAM199XQ6PEV8 388 aaPredicted RBP6.51□□□□□ -1.37
CD44-221ENST00000526000 CRTC3Q6UUV7 619 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 C6orf15Q6UXA7 325 aaPredicted RBP6.51□□□□□ -1.37
CD44-221ENST00000526000 ADAMTSL4Q6UY14 1074 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 ASB18Q6ZVZ8 466 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 B4GALNT4Q76KP1 1039 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 ZNF571Q7Z3V5 609 aaPredicted RBP6.51□□□□□ -1.37
CD44-221ENST00000526000 POLNQ7Z5Q5 900 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 SLC9B2Q86UD5 537 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 CPNE8Q86YQ8 564 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 NDUFAF2Q8N183 169 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 SFRP1Q8N474 314 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 FAM26EQ8N5C1 309 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 ATPAF2Q8N5M1 289 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 LPCAT1Q8NF37 534 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 EXD1Q8NHP7 514 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 ANP32BQ92688 251 aaKnown RBP6.51□□□□□ -1.37
CD44-221ENST00000526000 SCARF2Q96GP6 870 aaPredicted RBP6.51□□□□□ -1.37
CD44-221ENST00000526000 ZNF599Q96NL3 588 aa6.51□□□□□ -1.37
CD44-221ENST00000526000 NAP1L5Q96NT1 182 aaPredicted RBP6.51□□□□□ -1.37
CD44-221ENST00000526000 CSPG4P5Q96PW8 444 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms