RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 YARS2Q9Y2Z4 477 aaKnown RBP13.63□□□□□ -0.23
LRRK1-202ENST00000525284 C13orf42A0A1B0GVH6 325 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 TNFRSF11BO00300 401 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 GJB6O95452 261 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 UROSP10746 265 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 MTHFD1P11586 935 aaKnown RBP13.63□□□□□ -0.23
LRRK1-202ENST00000525284 ELP6Q0PNE2 266 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 BST1Q10588 318 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 ZNF267Q14586 743 aaPredicted RBP13.63□□□□□ -0.23
LRRK1-202ENST00000525284 C15orf59Q2T9L4 293 aaPredicted RBP13.63□□□□□ -0.23
LRRK1-202ENST00000525284 GRHL2Q6ISB3 625 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 GK5Q6ZS86 529 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 DEFB106AQ8N104 65 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 PQLC1Q8N2U9 271 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 POC1BQ8TC44 478 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 ADAMTS15Q8TE58 950 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 SLC37A4O43826 429 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 CCNHP51946 323 aaPredicted RBP13.63□□□□□ -0.23
LRRK1-202ENST00000525284 SLC5A3P53794 718 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 NPNTQ6UXI9 565 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 SDR16C5Q8N3Y7 309 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 TSEN2Q8NCE0 465 aaKnown RBP13.63□□□□□ -0.23
LRRK1-202ENST00000525284 C7orf57Q8NEG2 295 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 OR10H4Q8NGA5 316 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 TMCO6Q96DC7 493 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 SERPINB11Q96P15 392 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 RBM4BQ9BQ04 359 aaKnown RBP13.63□□□□□ -0.23
LRRK1-202ENST00000525284 RBM4Q9BWF3 364 aaKnown RBP13.63□□□□□ -0.23
LRRK1-202ENST00000525284 SNTG2Q9NY99 539 aa13.63□□□□□ -0.23
LRRK1-202ENST00000525284 ROBO2Q9HCK4 1378 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 PGLSO95336 258 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 IDO1P14902 403 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 HOXB8P17481 243 aaPredicted RBP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 AIMP2Q13155 320 aaKnown RBP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 XKRXQ6PP77 449 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 MPP5Q8N3R9 675 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 C12orf43Q96C57 262 aaKnown RBP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 PPP1R16AQ96I34 528 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 JSRP1Q96MG2 331 aaPredicted RBP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 FEM1AQ9BSK4 669 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 AARSD1Q9BTE6 412 aaKnown RBP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 BRD9Q9H8M2 597 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 ARHGAP20Q9P2F6 1191 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 MRTO4Q9UKD2 239 aaKnown RBP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 HOXA2O43364 376 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 BANF1O75531 89 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 IFNA21P01568 189 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 FABP3P05413 133 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 SMARCB1Q12824 385 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 PARP6Q2NL67 630 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 VPS26BQ4G0F5 336 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 TIGD2Q4W5G0 525 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 ARSKQ6UWY0 536 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 ZNF227Q86WZ6 799 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 LZTR1Q8N653 840 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 THAP6Q8TBB0 222 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 PGM2Q96G03 612 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 MRPL9Q9BYD2 267 aaKnown RBP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 IL22Q9GZX6 179 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 MAN2B2Q9Y2E5 1009 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 POFUT2Q9Y2G5 429 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 SCAMP1O15126 338 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 MSL3Q8N5Y2 521 aaKnown RBP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 XAGE5Q8WWM1 108 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 GDF3Q9NR23 364 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 PCDHB12Q9Y5F1 795 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 UNC13BO14795 1591 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 FADS2P1A8MWK0 482 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 SEPT4O43236 478 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 GCATO75600 419 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 RGS8P57771 180 aaPredicted RBP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 ARFRP1Q13795 201 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 PSTKQ8IV42 348 aaKnown RBP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 BPIFB1Q8TDL5 484 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 CCDC107Q8WV48 283 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 AP2M1Q96CW1 435 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 CHST7Q9NS84 486 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 POLR3BQ9NW08 1133 aaPredicted RBP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 RAP2CQ9Y3L5 183 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 TBC1D3BA6NDS4 549 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 OTOL1A6NHN0 477 aaPredicted RBP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 TPST2O60704 377 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 PRAMEF1O95521 474 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 SLC25A27O95847 323 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 IFNA2P01563 188 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 FESP07332 822 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 USP17L7P0C7H9 530 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 YAP1P46937 504 aaKnown RBP13.62□□□□□ -0.23
LRRK1-202ENST00000525284 SLC9A3P48764 834 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 GRB10Q13322 594 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 PLA2G4EQ3MJ16 856 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 ZNF398Q8TD17 642 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 IGDCC4Q8TDY8 1250 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 NUDT15Q9NV35 164 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 MTMR10Q9NXD2 777 aa13.62□□□□□ -0.23
LRRK1-202ENST00000525284 AZIN1O14977 448 aa13.61□□□□□ -0.23
LRRK1-202ENST00000525284 PAPSS2O95340 614 aaPredicted RBP13.61□□□□□ -0.23
LRRK1-202ENST00000525284 MT-ND1P03886 318 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms