RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 ERI2A8K979 691 aaKnown RBP13.09□□□□□ -0.31
TRIM3-203ENST00000525074 XPNPEP2O43895 674 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 CRCPO75575 148 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 CNTN5O94779 1100 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 HTR1AP08908 422 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 CYP2C9P11712 490 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 HMGB2P26583 209 aaKnown RBP13.09□□□□□ -0.31
TRIM3-203ENST00000525074 ARSFP54793 590 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 MTPNP58546 118 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 UFM1P61960 85 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 IL1RL1Q01638 556 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 KCNC4Q03721 635 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 ITKQ08881 620 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 INAQ16352 499 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 ZNF678Q5SXM1 525 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 HECTD2Q5U5R9 776 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 OSTM1Q86WC4 334 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 FAM86B1Q8N7N1 296 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 TERB1Q8NA31 727 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 ARRDC4Q8NCT1 418 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 OR10Q1Q8NGQ4 319 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 GLMNQ92990 594 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 C16orf70Q9BSU1 422 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 KCTD3Q9Y597 815 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 HSD17B1P14061 328 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 NR4A2P43354 598 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 ACADSBP45954 432 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 SEPHS1P49903 392 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 VBP1P61758 197 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 DPY19L1Q2PZI1 675 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 WSCD1Q658N2 575 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 GTF2IRD2BQ6EKJ0 949 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 GTF2IRD2Q86UP8 949 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 CLIP4Q8N3C7 705 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 TTC39CQ8N584 583 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 B3GALNT2Q8NCR0 500 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 C2CD4AQ8NCU7 369 aaPredicted RBP13.09□□□□□ -0.31
TRIM3-203ENST00000525074 APPL2Q8NEU8 664 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 FBXO30Q8TB52 745 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 ACOX2Q99424 681 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 NDEL1Q9GZM8 345 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 EHD1Q9H4M9 534 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 NOL6Q9H6R4 1146 aaKnown RBP13.09□□□□□ -0.31
TRIM3-203ENST00000525074 WDCPQ9H6R7 721 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 ATP13A3Q9H7F0 1226 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 MARCH7Q9H992 704 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 ITM2CQ9NQX7 267 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 NDFIP2Q9NV92 336 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 TMEM9Q9P0T7 183 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 DNMT3BQ9UBC3 853 aaKnown RBP13.09□□□□□ -0.31
TRIM3-203ENST00000525074 SEPT3Q9UH03 358 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 POLG2Q9UHN1 485 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 TSR3Q9UJK0 312 aaKnown RBP13.09□□□□□ -0.31
TRIM3-203ENST00000525074 TRHDEQ9UKU6 1024 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 PCDHGA11Q9Y5H2 935 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 OAS3Q9Y6K5 1087 aaKnown RBP13.09□□□□□ -0.31
TRIM3-203ENST00000525074 TTC3P53804 2025 aa13.09□□□□□ -0.31
TRIM3-203ENST00000525074 IQCA1LA6NCM1 817 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 ABCB7O75027 752 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 NADKO95544 446 aaPredicted RBP13.08□□□□□ -0.32
TRIM3-203ENST00000525074 IMPDH1P20839 514 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 CRHBPP24387 322 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 PRDX3P30048 256 aaKnown RBP13.08□□□□□ -0.32
TRIM3-203ENST00000525074 KPNA2P52292 529 aaKnown RBP13.08□□□□□ -0.32
TRIM3-203ENST00000525074 POU4F1Q01851 419 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 GRSF1Q12849 480 aaKnown RBP eCLIP13.08□□□□□ -0.32
TRIM3-203ENST00000525074 BNIP2Q12982 314 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 NOL9Q5SY16 702 aaKnown RBP13.08□□□□□ -0.32
TRIM3-203ENST00000525074 TAPT1Q6NXT6 567 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 USP51Q70EK9 711 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 SLC22A16Q86VW1 577 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 LGI2Q8N0V4 545 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 CLYBLQ8N0X4 340 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 CAPSLQ8WWF8 208 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 HSFY1Q96LI6 401 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 MROQ9BYG7 248 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 MARCH4Q9P2E8 410 aaPredicted RBP13.08□□□□□ -0.32
TRIM3-203ENST00000525074 VWA7Q9Y334 891 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 PCDHA9Q9Y5H5 950 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 TCRBV5S2A0A599 114 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 ASPDHA6ND91 283 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 GPIP06744 558 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 HRH2P25021 359 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 RAB15P59190 212 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 CTU2Q2VPK5 515 aaKnown RBP13.08□□□□□ -0.32
TRIM3-203ENST00000525074 RNF19BQ6ZMZ0 732 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 SLC16A12Q6ZSM3 486 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 CCDC80Q76M96 950 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 ISCA2Q86U28 154 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 ZCCHC7Q8N3Z6 543 aaKnown RBP13.08□□□□□ -0.32
TRIM3-203ENST00000525074 MINDY1Q8N5J2 469 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 BEST2Q8NFU1 509 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 PSMA8Q8TAA3 256 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 CCDC97Q96F63 343 aaPredicted RBP13.08□□□□□ -0.32
TRIM3-203ENST00000525074 SNX27Q96L92 541 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 NTN4Q9HB63 628 aa13.08□□□□□ -0.32
TRIM3-203ENST00000525074 INTS10Q9NVR2 710 aaKnown RBP13.08□□□□□ -0.32
TRIM3-203ENST00000525074 SMIM28A0A1B0GU29 152 aa13.07□□□□□ -0.32
TRIM3-203ENST00000525074 THRBP10828 461 aa13.07□□□□□ -0.32
TRIM3-203ENST00000525074 KCNK10P57789 538 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms