RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-215	ENST00000524393	PIRT	P0C851	137 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	SLC2A4	P14672	509 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	NFKB1	P19838	968 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	FECH	P22830	423 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	CTNNA1	P35221	906 aa	Known RBP	12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	GPR3	P46089	330 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	MARCKSL1	P49006	195 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	PPM1F	P49593	454 aa	Predicted RBP	12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	DCDC1	P59894	354 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	XRCC4	Q13426	336 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	CLPP	Q16740	277 aa	Predicted RBP	12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	ALS2CL	Q60I27	953 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	PDPK2P	Q6A1A2	396 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	BBS12	Q6ZW61	710 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	CHST15	Q7LFX5	561 aa	Predicted RBP	12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	B3GNT8	Q7Z7M8	397 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	PIM3	Q86V86	326 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	C17orf82	Q86X59	251 aa	Predicted RBP	12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	PHYKPL	Q8IUZ5	450 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	SFTPA2	Q8IWL1	248 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	SPACA3	Q8IXA5	215 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	NAGS	Q8N159	534 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	TRAM1L1	Q8N609	369 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	HTR3C	Q8WXA8	447 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	TADA1	Q96BN2	335 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	QKI	Q96PU8	341 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	CMKLR1	Q99788	373 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	HEMGN	Q9BXL5	484 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	FSD1L	Q9BXM9	530 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	DPH1	Q9BZG8	443 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	UBP1	Q9NZI7	540 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	RSPH14	Q9UHP6	348 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	TRHDE	Q9UKU6	1024 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	PCDHA3	Q9Y5H8	950 aa		12.49	□□□□□ -0.41
RBBP4-215	ENST00000524393	EIF4E1B	A6NMX2	242 aa	Known RBP	12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	BTNL10	A8MVZ5	291 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	GPR89A	B7ZAQ6	455 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393		H7C0C1	242 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	CASC3	O15234	703 aa	Known RBP	12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	KLK10	O43240	276 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	STK10	O94804	968 aa	Known RBP	12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	SLC25A14	O95258	325 aa	Predicted RBP	12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	GPR89B	P0CG08	455 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	UGT1A5	P35504	534 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	ATP5O	P48047	213 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	VAV2	P52735	878 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	RWDD2B	P57060	319 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	TMPRSS3	P57727	454 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	TLE3	Q04726	772 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	WASHC5	Q12768	1159 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	NR1D2	Q14995	579 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	AMZ1	Q400G9	498 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	PHF19	Q5T6S3	580 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	ITPRIPL1	Q6GPH6	555 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	ZNF438	Q7Z4V0	828 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	TMC3	Q7Z5M5	1100 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	JAML	Q86YT9	394 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	GPR26	Q8NDV2	337 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	KRT35	Q92764	455 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	FCRL3	Q96P31	734 aa	Predicted RBP	12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	FCRL5	Q96RD9	977 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	WDR24	Q96S15	920 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	BAG1	Q99933	345 aa	Predicted RBP	12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	CARD9	Q9H257	536 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	TRABD	Q9H4I3	376 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	HACD3	Q9P035	362 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	EFR3B	Q9Y2G0	817 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	PLEKHM1	Q9Y4G2	1056 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	LOXL2	Q9Y4K0	774 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	PKD1L2	Q7Z442	2459 aa		12.48	□□□□□ -0.41
RBBP4-215	ENST00000524393	KNTC1	P50748	2209 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	CDRT15L2	A8MXV6	281 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	GRID2	O43424	1007 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	DNAJC6	O75061	913 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	ZNF189	O75820	626 aa	Predicted RBP	12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	EPO	P01588	193 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	ACP5	P13686	325 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	HLA-DPA1	P20036	260 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	WNT3A	P56704	352 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	OR1D5	P58170	312 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	CXADR	P78310	365 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	B4GALNT1	Q00973	533 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	ADCY2	Q08462	1091 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	MPP3	Q13368	585 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	NOMO1	Q15155	1222 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	FAM182A	Q5T1J6	154 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	ZDHHC20	Q5W0Z9	365 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	RAD9B	Q6WBX8	426 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	GPR155	Q7Z3F1	870 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	CLEC14A	Q86T13	490 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	CDKL3	Q8IVW4	592 aa	Predicted RBP	12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	SYCE1	Q8N0S2	351 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	ZNF567	Q8N184	647 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	AVL9	Q8NBF6	648 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	IPMK	Q8NFU5	416 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	PATE1	Q8WXA2	126 aa		12.47	□□□□□ -0.41
RBBP4-215	ENST00000524393	GLYATL1	Q969I3	302 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms