RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 DEFB133Q30KQ1 61 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 PAPD7Q5XG87 772 aaKnown RBP12.43□□□□□ -0.42
CCNC-216ENST00000523961 NYAP1Q6ZVC0 841 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 PRUNE1Q86TP1 453 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 GLIS1Q8NBF1 620 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 GLMNQ92990 594 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 GLYATL1Q969I3 302 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 SCARF2Q96GP6 870 aaPredicted RBP12.43□□□□□ -0.42
CCNC-216ENST00000523961 APOLD1Q96LR9 279 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 C19orf43Q9BQ61 176 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 TMEM168Q9H0V1 697 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 IL26Q9NPH9 171 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 TRNAU1APQ9NX07 287 aaKnown RBP12.43□□□□□ -0.42
CCNC-216ENST00000523961 NCKIPSDQ9NZQ3 722 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 SUFUQ9UMX1 484 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 TMEM98Q9Y2Y6 226 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 PCDHGA1Q9Y5H4 931 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 ARL5AQ9Y689 179 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 GLYATL1P3A0A0U1RQE8 302 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 ZNF185O15231 689 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 BUD23O43709 281 aaKnown RBP12.42□□□□□ -0.42
CCNC-216ENST00000523961 SUN1O94901 812 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 GAS8O95995 478 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 FUCA1P04066 466 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 APRTP07741 180 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 CELA2BP08218 269 aaPredicted RBP12.42□□□□□ -0.42
CCNC-216ENST00000523961 CDK4P11802 303 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 COILP38432 576 aaPredicted RBP12.42□□□□□ -0.42
CCNC-216ENST00000523961 GNPDA1P46926 289 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 POLD2P49005 469 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 DUSP3P51452 185 aaPredicted RBP12.42□□□□□ -0.42
CCNC-216ENST00000523961 CDH17Q12864 832 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 ILF3Q12906 894 aaKnown RBP eCLIP12.42□□□□□ -0.42
CCNC-216ENST00000523961 DNAJC3Q13217 504 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 C6orf132Q5T0Z8 1188 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 PPP1R21Q6ZMI0 780 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 TAF8Q7Z7C8 310 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 SLCO6A1Q86UG4 719 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 PHYKPLQ8IUZ5 450 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 DNAAF3Q8N9W5 541 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 OR4K2Q8NGD2 314 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 ADAMTS14Q8WXS8 1223 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 VPS35Q96QK1 796 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 OR2M4Q96R27 311 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 GSDMCQ9BYG8 508 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 SUDS3Q9H7L9 328 aaPredicted RBP12.42□□□□□ -0.42
CCNC-216ENST00000523961 RMI1Q9H9A7 625 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 TOR4AQ9NXH8 423 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 SMARCAL1Q9NZC9 954 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 SAR1BQ9Y6B6 198 aa12.42□□□□□ -0.42
CCNC-216ENST00000523961 OAS3Q9Y6K5 1087 aaKnown RBP12.42□□□□□ -0.42
CCNC-216ENST00000523961 GPR89AB7ZAQ6 455 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 LDB2O43679 373 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 PHF2O75151 1096 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 RFPL3O75679 317 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 DKK1O94907 266 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 GPR89BP0CG08 455 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 CKMT1AP12532 417 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 TPH1P17752 444 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 ACP1P24666 158 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 PMLP29590 882 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 ADCY8P40145 1251 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 HADHAP40939 763 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 RPIAP49247 311 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 FNTAP49354 379 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 ACADVLP49748 655 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 ZNF140P52738 457 aaPredicted RBP12.41□□□□□ -0.42
CCNC-216ENST00000523961 BASP1P80723 227 aaKnown RBP12.41□□□□□ -0.42
CCNC-216ENST00000523961 ILKQ13418 452 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 PEX6Q13608 980 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 ITGA9Q13797 1035 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 TCEA2Q15560 299 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 CHRNA6Q15825 494 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 ATP13A5Q4VNC0 1218 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 PYCR3Q53H96 274 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 CCDC157Q569K6 752 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 TTC27Q6P3X3 843 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 CCDC137Q6PK04 289 aaKnown RBP12.41□□□□□ -0.42
CCNC-216ENST00000523961 FAM151BQ6UXP7 276 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 MARK2Q7KZI7 788 aaKnown RBP12.41□□□□□ -0.42
CCNC-216ENST00000523961 GALNT13Q8IUC8 556 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 OR52K1Q8NGK4 314 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 GPBAR1Q8TDU6 330 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 GRK7Q8WTQ7 553 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 PTCD2Q8WV60 388 aaKnown RBP12.41□□□□□ -0.42
CCNC-216ENST00000523961 BOCQ9BWV1 1114 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 TRIM39Q9HCM9 518 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 EIF2B3Q9NR50 452 aaKnown RBP12.41□□□□□ -0.42
CCNC-216ENST00000523961 ZNHIT2Q9UHR6 403 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 APPL1Q9UKG1 709 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 GPR34Q9UPC5 381 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 GPSM3Q9Y4H4 160 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 KCTD3Q9Y597 815 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 GOLGA4Q13439 2230 aaKnown RBP12.41□□□□□ -0.42
CCNC-216ENST00000523961 LRP4O75096 1905 aa12.41□□□□□ -0.42
CCNC-216ENST00000523961 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.4□□□□□ -0.42
CCNC-216ENST00000523961 GAPDHSO14556 408 aaPredicted RBP12.4□□□□□ -0.42
CCNC-216ENST00000523961 VEGFDO43915 354 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 NUAK1O60285 661 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 DNAJC6O75061 913 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms