RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 LRRC61Q9BV99 259 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 PANK2Q9BZ23 570 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 SPTLC3Q9NUV7 552 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 TUBD1Q9UJT1 453 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 CLIC4Q9Y696 253 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 CSNK1G3Q9Y6M4 447 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 SHANK1Q9Y566 2161 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 C1QTNF3-AMACRE9PGA6 284 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 DDX3XO00571 662 aaKnown RBP eCLIP6.43□□□□□ -1.38
VPS13B-211ENST00000522802 NEMP1O14524 444 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 TPP1O14773 563 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 EXOC3O60645 756 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 FBXO21O94952 628 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 BMP15O95972 392 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 ZSCAN22P10073 491 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-211ENST00000522802 LIFP15018 202 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 PDGFRAP16234 1089 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 CCKBRP32239 447 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 SLURP1P55000 103 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 MLLT10P55197 1068 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 IL2P60568 153 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 CCL7P80098 99 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 EIF2B5Q13144 721 aaKnown RBP6.43□□□□□ -1.38
VPS13B-211ENST00000522802 PDE1CQ14123 709 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-211ENST00000522802 STILQ15468 1287 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 DCAF6Q58WW2 860 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 MS4A13Q5J8X5 152 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 FAM26FQ5R3K3 315 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 LCE5AQ5TCM9 118 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 FAM46CQ5VWP2 391 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 NUGGCQ68CJ6 796 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 ESRP1Q6NXG1 681 aaKnown RBP6.43□□□□□ -1.38
VPS13B-211ENST00000522802 MSANTD2Q6P1R3 559 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 TMPRSS9Q7Z410 1059 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 C12orf56Q8IXR9 622 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 PDILTQ8N807 584 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 ZNF557Q8N988 423 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-211ENST00000522802 SLC4A11Q8NBS3 891 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 HIPK4Q8NE63 616 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 OR52K2Q8NGK3 314 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 WDR48Q8TAF3 677 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 SPATA20Q8TB22 786 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 TAS1R2Q8TE23 839 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 CLEC4CQ8WTT0 213 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 SSC4DQ8WTU2 575 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 TAF4BQ92750 862 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 USP7Q93009 1102 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 GFM1Q96RP9 751 aaKnown RBP6.43□□□□□ -1.38
VPS13B-211ENST00000522802 TTC1Q99614 292 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 IL12RB2Q99665 862 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 TACO1Q9BSH4 297 aaKnown RBP6.43□□□□□ -1.38
VPS13B-211ENST00000522802 BTBD2Q9BX70 525 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 CPEB1Q9BZB8 566 aaKnown RBP6.43□□□□□ -1.38
VPS13B-211ENST00000522802 STRADBQ9C0K7 418 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 CLPBQ9H078 707 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 IFT22Q9H7X7 185 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 ZMAT4Q9H898 229 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 EMC7Q9NPA0 242 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 APOBEC3BQ9UH17 382 aaKnown RBP6.43□□□□□ -1.38
VPS13B-211ENST00000522802 PADI4Q9UM07 663 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 DAAM1Q9Y4D1 1078 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 HIVEP1P15822 2718 aa6.43□□□□□ -1.38
VPS13B-211ENST00000522802 UNC13CQ8NB66 2214 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 FBN3Q75N90 2809 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 TYW5A2RUC4 315 aaKnown RBP6.42□□□□□ -1.38
VPS13B-211ENST00000522802 H3BQV1 296 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 K7EM74 188 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 KPNA3O00505 521 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-211ENST00000522802 ALOX15BO15296 676 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 PCDH8O95206 1070 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 MOCS3O95396 460 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 CLDN1O95832 211 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 MOCS2O96007 188 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-211ENST00000522802 RPN1P04843 607 aaKnown RBP6.42□□□□□ -1.38
VPS13B-211ENST00000522802 PRKCGP05129 697 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 TRIM49P0CI25 452 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 TRIM49CP0CI26 452 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 TRIM21P19474 475 aaKnown RBP6.42□□□□□ -1.38
VPS13B-211ENST00000522802 ELAVL4P26378 380 aaKnown RBP6.42□□□□□ -1.38
VPS13B-211ENST00000522802 CASP1P29466 404 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 AP3M2P53677 418 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 MAPK10P53779 464 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 RAD23BP54727 409 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 ADKP55263 362 aaKnown RBP6.42□□□□□ -1.38
VPS13B-211ENST00000522802 TBX4P57082 545 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 PHC1P78364 1004 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 ACCSLQ4AC99 568 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 CT47A1Q5JQC4 288 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-211ENST00000522802 RAP1GAP2Q684P5 730 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 CAPRIN2Q6IMN6 1127 aaKnown RBP6.42□□□□□ -1.38
VPS13B-211ENST00000522802 CXorf57Q6NSI4 855 aaKnown RBP6.42□□□□□ -1.38
VPS13B-211ENST00000522802 CCDC73Q6ZRK6 1079 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 CXXC5Q7LFL8 322 aaKnown RBP6.42□□□□□ -1.38
VPS13B-211ENST00000522802 PASD1Q8IV76 773 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 SRRM1Q8IYB3 904 aaKnown RBP6.42□□□□□ -1.38
VPS13B-211ENST00000522802 LGI2Q8N0V4 545 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 ARL10Q8N8L6 244 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 ZSCAN31Q96LW9 406 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-211ENST00000522802 KLF6Q99612 283 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-211ENST00000522802 FOXB1Q99853 325 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms