RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 C12orf29Q8N999 325 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 ACBD4Q8NC06 268 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 FDCSPQ8NFU4 85 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 OR8D1Q8WZ84 308 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 RELTQ969Z4 430 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 ZIM3Q96PE6 472 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 LENG8Q96PV6 779 aaPredicted RBP7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 TRIM51Q9BSJ1 452 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 C1QTNF2Q9BXJ5 285 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 SLC13A1Q9BZW2 595 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 TRIM7Q9C029 511 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 TWSG1Q9GZX9 223 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 SMYD3Q9H7B4 428 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 MED4Q9NPJ6 270 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 PSD3Q9NYI0 1048 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 AMACRQ9UHK6 382 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 PCDHGB7Q9Y5F8 929 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 PCDHA3Q9Y5H8 950 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 COPG1Q9Y678 874 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 TCRBV7S2A1N4TA0A589 114 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 PIPSLA2A3N6 862 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 GOLGA6BA6NDN3 693 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 FPGTO14772 594 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 DAPK3O43293 454 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 THAP12O43422 761 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 KCNAB3O43448 404 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 HSF2BPO75031 334 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 KATNA1O75449 491 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 CREG1O75629 220 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 CLSTN1O94985 981 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 RECKO95980 971 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 ASS1P00966 412 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 PYGMP11217 842 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 RRM1P23921 792 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 TBXAS1P24557 533 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 GNA15P30679 374 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 CTNNA1P35221 906 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 FLT3P36888 993 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 HSPA9P38646 679 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 HK3P52790 923 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 RAB15P59190 212 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 PPARDQ03181 441 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 CENPCQ03188 943 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 TRA2AQ13595 282 aaKnown RBP eCLIP7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 CUL1Q13616 776 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 MAP7Q14244 749 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 ELOCQ15369 112 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 SIX1Q15475 284 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 SURF1Q15526 300 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 CHRNA6Q15825 494 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 DUOXA2Q1HG44 320 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 ALG11Q2TAA5 492 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 WDR72Q3MJ13 1102 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 HSP90B2PQ58FF3 399 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 NKAIN2Q5VXU1 208 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 TRIM72Q6ZMU5 477 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 MON1BQ7L1V2 547 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 BHLHA9Q7RTU4 235 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 MRGPRGQ86SM5 289 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 FAM129CQ86XR2 697 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 PHF13Q86YI8 300 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 SLC13A5Q86YT5 568 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 PASD1Q8IV76 773 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 ESX1Q8N693 406 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 PRELID2Q8N945 189 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 EIF1ADQ8N9N8 165 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 ZNF606Q8WXB4 792 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 KCTD13Q8WZ19 329 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 SEC14L1Q92503 715 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 TSACCQ96A04 125 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 FUBP1Q96AE4 644 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 ARL8AQ96BM9 186 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 CENPTQ96BT3 561 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 TEFMQ96QE5 360 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 RUFY1Q96T51 708 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 SH3GL2Q99962 352 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 TMEM121Q9BTD3 319 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 ING2Q9H160 280 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 XYLT2Q9H1B5 865 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 DPH5Q9H2P9 285 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 TRIT1Q9H3H1 467 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 HMGXB4Q9UGU5 601 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 SFMBT1Q9UHJ3 866 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 DOLKQ9UPQ8 538 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 FER1L5A0AVI2 2057 aa7.3□□□□□ -1.24
CTNNA1-227ENST00000521387 A0A1B0GUH1 482 aa7.29□□□□□ -1.24
CTNNA1-227ENST00000521387 CCDC66A2RUB6 948 aa7.29□□□□□ -1.24
CTNNA1-227ENST00000521387 IGLON5A6NGN9 336 aa7.29□□□□□ -1.24
CTNNA1-227ENST00000521387 ARGFXA6NJG6 315 aa7.29□□□□□ -1.24
CTNNA1-227ENST00000521387 C1QTNF3-AMACRE9PGA6 284 aa7.29□□□□□ -1.24
CTNNA1-227ENST00000521387 INPP4BO15327 924 aa7.29□□□□□ -1.24
CTNNA1-227ENST00000521387 SPOPO43791 374 aa7.29□□□□□ -1.24
CTNNA1-227ENST00000521387 NUDT21O43809 227 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-227ENST00000521387 ATP9BO43861 1147 aa7.29□□□□□ -1.24
CTNNA1-227ENST00000521387 PHF2O75151 1096 aa7.29□□□□□ -1.24
CTNNA1-227ENST00000521387 LATS1O95835 1130 aa7.29□□□□□ -1.24
CTNNA1-227ENST00000521387 TNNC2P02585 160 aa7.29□□□□□ -1.24
CTNNA1-227ENST00000521387 MYBL1P10243 752 aa7.29□□□□□ -1.24
CTNNA1-227ENST00000521387 RARAP10276 462 aa7.29□□□□□ -1.24
CTNNA1-227ENST00000521387 BRD2P25440 801 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms