RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 LRRC49Q8IUZ0 686 aa19.85■□□□□ 0.77
HDAC2-207ENST00000520170 SLC45A3Q96JT2 553 aa19.85■□□□□ 0.77
HDAC2-207ENST00000520170 KLHL3Q9UH77 587 aa19.85■□□□□ 0.77
HDAC2-207ENST00000520170 TUBD1Q9UJT1 453 aa19.85■□□□□ 0.77
HDAC2-207ENST00000520170 KCNK6Q9Y257 313 aa19.85■□□□□ 0.77
HDAC2-207ENST00000520170 LOC101059948A0A1B0GTJ6 334 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 MFSD11O43934 449 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 SNX2O60749 519 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 DNAJC6O75061 913 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 CD48P09326 243 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 ACP5P13686 325 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 IL4RP24394 825 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 MAP4P27816 1152 aaKnown RBP19.84■□□□□ 0.77
HDAC2-207ENST00000520170 GARSP41250 739 aaKnown RBP19.84■□□□□ 0.77
HDAC2-207ENST00000520170 SLC25A11Q02978 314 aaKnown RBP19.84■□□□□ 0.77
HDAC2-207ENST00000520170 TYRO3Q06418 890 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 IYDQ6PHW0 289 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 KDELC2Q7Z4H8 507 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 SPRY4Q9C004 299 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 EPN3Q9H201 632 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 STN1Q9H668 368 aaKnown RBP19.84■□□□□ 0.77
HDAC2-207ENST00000520170 APMAPQ9HDC9 416 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 SARS2Q9NP81 518 aaKnown RBP19.84■□□□□ 0.77
HDAC2-207ENST00000520170 ZNF71Q9NQZ8 489 aaPredicted RBP19.84■□□□□ 0.77
HDAC2-207ENST00000520170 RBM22Q9NW64 420 aaKnown RBP eCLIP19.84■□□□□ 0.77
HDAC2-207ENST00000520170 VPS18Q9P253 973 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 IP6K2Q9UHH9 426 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 ANAPC7Q9UJX3 599 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 DNPEPQ9ULA0 475 aa19.84■□□□□ 0.77
HDAC2-207ENST00000520170 CNOT6Q9ULM6 557 aaKnown RBP19.84■□□□□ 0.77
HDAC2-207ENST00000520170 PRLP01236 227 aa19.83■□□□□ 0.77
HDAC2-207ENST00000520170 MAN1A1P33908 653 aa19.83■□□□□ 0.77
HDAC2-207ENST00000520170 ZNF165P49910 485 aa19.83■□□□□ 0.77
HDAC2-207ENST00000520170 SRSF1Q07955 248 aaKnown RBP eCLIP19.83■□□□□ 0.77
HDAC2-207ENST00000520170 ANO6Q4KMQ2 910 aa19.83■□□□□ 0.77
HDAC2-207ENST00000520170 TIPARPQ7Z3E1 657 aaKnown RBP19.83■□□□□ 0.77
HDAC2-207ENST00000520170 NIPA2Q8N8Q9 360 aa19.83■□□□□ 0.77
HDAC2-207ENST00000520170 LPCAT1Q8NF37 534 aa19.83■□□□□ 0.77
HDAC2-207ENST00000520170 SH3KBP1Q96B97 665 aa19.83■□□□□ 0.77
HDAC2-207ENST00000520170 GBP4Q96PP9 640 aa19.83■□□□□ 0.77
HDAC2-207ENST00000520170 WDR24Q96S15 920 aa19.83■□□□□ 0.77
HDAC2-207ENST00000520170 TDRD1Q9BXT4 1180 aaKnown RBP19.83■□□□□ 0.77
HDAC2-207ENST00000520170 NAT10Q9H0A0 1025 aaKnown RBP19.83■□□□□ 0.77
HDAC2-207ENST00000520170 THAP2Q9H0W7 228 aa19.83■□□□□ 0.77
HDAC2-207ENST00000520170 FBXO8Q9NRD0 319 aa19.83■□□□□ 0.77
HDAC2-207ENST00000520170 RCOR3Q9P2K3 495 aaPredicted RBP19.83■□□□□ 0.77
HDAC2-207ENST00000520170 C1orf232A0A0U1RR37 186 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 MATN3O15232 486 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 STK17BO94768 372 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 CES1P23141 567 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 GALNT2Q10471 571 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 CDC20Q12834 499 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 TDRD12Q587J7 1177 aaKnown RBP19.82■□□□□ 0.76
HDAC2-207ENST00000520170 CCDC183Q5T5S1 534 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 TIGD7Q6NT04 549 aaPredicted RBP19.82■□□□□ 0.76
HDAC2-207ENST00000520170 SLC9B2Q86UD5 537 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 C9orf43Q8TAL5 461 aaPredicted RBP19.82■□□□□ 0.76
HDAC2-207ENST00000520170 LRRN4Q8WUT4 740 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 MAML1Q92585 1016 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 NAP1L5Q96NT1 182 aaPredicted RBP19.82■□□□□ 0.76
HDAC2-207ENST00000520170 ZPBPQ9BS86 351 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 EFHD1Q9BUP0 239 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 NUP85Q9BW27 656 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 TBC1D10AQ9BXI6 508 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 PCDH9Q9HC56 1237 aa19.82■□□□□ 0.76
HDAC2-207ENST00000520170 FADS2P1A8MWK0 482 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 POLR1CO15160 346 aaPredicted RBP19.81■□□□□ 0.76
HDAC2-207ENST00000520170 CA4P22748 312 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 GJC1P36383 396 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 SPINT3P49223 89 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 NIPAL4Q0D2K0 466 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 ABHD18Q0P651 414 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 IGFBP7Q16270 282 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 IFI16Q16666 785 aaKnown RBP19.81■□□□□ 0.76
HDAC2-207ENST00000520170 DEFB109BQ30KR1 87 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 NCBP2-AS2Q69YL0 99 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 ALG1LQ6GMV1 187 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 LYSMD3Q7Z3D4 306 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 ARRDC2Q8TBH0 407 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 RNF31Q96EP0 1072 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 HERPUD2Q9BSE4 406 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 FAM83DQ9H4H8 585 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 RMI1Q9H9A7 625 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 HAUS2Q9NVX0 235 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 CPNE7Q9UBL6 633 aa19.81■□□□□ 0.76
HDAC2-207ENST00000520170 ZNF106Q9H2Y7 1883 aaKnown RBP19.81■□□□□ 0.76
HDAC2-207ENST00000520170 A6NCN8 305 aa19.8■□□□□ 0.76
HDAC2-207ENST00000520170 SMTNL1A8MU46 457 aa19.8■□□□□ 0.76
HDAC2-207ENST00000520170 F3P13726 295 aa19.8■□□□□ 0.76
HDAC2-207ENST00000520170 SLC2A4P14672 509 aa19.8■□□□□ 0.76
HDAC2-207ENST00000520170 CCNCP24863 283 aa19.8■□□□□ 0.76
HDAC2-207ENST00000520170 OAS2P29728 719 aaKnown RBP19.8■□□□□ 0.76
HDAC2-207ENST00000520170 CASRP41180 1078 aa19.8■□□□□ 0.76
HDAC2-207ENST00000520170 NOP2P46087 812 aaKnown RBP19.8■□□□□ 0.76
HDAC2-207ENST00000520170 EPHA4P54764 986 aa19.8■□□□□ 0.76
HDAC2-207ENST00000520170 RPL26P61254 145 aaKnown RBP19.8■□□□□ 0.76
HDAC2-207ENST00000520170 DPYSL3Q14195 570 aa19.8■□□□□ 0.76
HDAC2-207ENST00000520170 PAFAH1B3Q15102 231 aaKnown RBP19.8■□□□□ 0.76
HDAC2-207ENST00000520170 HADHQ16836 314 aaKnown RBP19.8■□□□□ 0.76
HDAC2-207ENST00000520170 ATP13A4Q4VNC1 1196 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms