RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 FBXO8Q9NRD0 319 aa13.56□□□□□ -0.24
VDAC3-204ENST00000519072 VPS18Q9P253 973 aa13.56□□□□□ -0.24
VDAC3-204ENST00000519072 RCOR3Q9P2K3 495 aaPredicted RBP13.56□□□□□ -0.24
VDAC3-204ENST00000519072 ZNF106Q9H2Y7 1883 aaKnown RBP13.55□□□□□ -0.24
VDAC3-204ENST00000519072 USP9XQ93008 2570 aaPredicted RBP13.55□□□□□ -0.24
VDAC3-204ENST00000519072 INPP4BO15327 924 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 DNAJC6O75061 913 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 ASMTLO95671 621 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 IL4RP24394 825 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 MAN1A1P33908 653 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 PPM1FP49593 454 aaPredicted RBP13.55□□□□□ -0.24
VDAC3-204ENST00000519072 EPHB1P54762 984 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 EPHA4P54764 986 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 HHEXQ03014 270 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 IHHQ14623 411 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 SNAP47Q5SQN1 464 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 NIPA2Q8N8Q9 360 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 FAM71BQ8TC56 605 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 MAML1Q92585 1016 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 KIAA1143Q96AT1 154 aaPredicted RBP13.55□□□□□ -0.24
VDAC3-204ENST00000519072 SH3KBP1Q96B97 665 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 EFHD1Q9BUP0 239 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 TDRD1Q9BXT4 1180 aaKnown RBP13.55□□□□□ -0.24
VDAC3-204ENST00000519072 EPN3Q9H201 632 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 STN1Q9H668 368 aaKnown RBP13.55□□□□□ -0.24
VDAC3-204ENST00000519072 GPN2Q9H9Y4 310 aaPredicted RBP13.55□□□□□ -0.24
VDAC3-204ENST00000519072 AMACRQ9UHK6 382 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 ZNHIT2Q9UHR6 403 aa13.55□□□□□ -0.24
VDAC3-204ENST00000519072 CNOT6Q9ULM6 557 aaKnown RBP13.55□□□□□ -0.24
VDAC3-204ENST00000519072 TMEM184BQ9Y519 407 aaPredicted RBP13.55□□□□□ -0.24
VDAC3-204ENST00000519072 PCYT1BQ9Y5K3 369 aaPredicted RBP13.55□□□□□ -0.24
VDAC3-204ENST00000519072 OAS3Q9Y6K5 1087 aaKnown RBP13.55□□□□□ -0.24
VDAC3-204ENST00000519072 SPTAN1Q13813 2472 aaKnown RBP13.55□□□□□ -0.24
VDAC3-204ENST00000519072 SPENQ96T58 3664 aaKnown RBP13.54□□□□□ -0.24
VDAC3-204ENST00000519072 LOC101059948A0A1B0GTJ6 334 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 A6NCN8 305 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 A8MU76 341 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 NKX2-8O15522 239 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 MFSD11O43934 449 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 CLDN7O95471 211 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 PRLP01236 227 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 ATP1A1P05023 1023 aaKnown RBP13.54□□□□□ -0.24
VDAC3-204ENST00000519072 SKILP12757 684 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 CA4P22748 312 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 GARSP41250 739 aaKnown RBP13.54□□□□□ -0.24
VDAC3-204ENST00000519072 RPL26P61254 145 aaKnown RBP13.54□□□□□ -0.24
VDAC3-204ENST00000519072 DSC2Q02487 901 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 ABHD18Q0P651 414 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 GALNT2Q10471 571 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 NFATC2Q13469 925 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 KRT81Q14533 505 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 SKIDA1Q1XH10 827 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 FILIP1LQ4L180 1135 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 TIGD7Q6NT04 549 aaPredicted RBP13.54□□□□□ -0.24
VDAC3-204ENST00000519072 IYDQ6PHW0 289 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 CHST15Q7LFX5 561 aaPredicted RBP13.54□□□□□ -0.24
VDAC3-204ENST00000519072 TIPARPQ7Z3E1 657 aaKnown RBP13.54□□□□□ -0.24
VDAC3-204ENST00000519072 NCSTNQ92542 709 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 FATE1Q969F0 183 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 WDR24Q96S15 920 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 LYSMD1Q96S90 227 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 CTRCQ99895 268 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 HERPUD2Q9BSE4 406 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 MFRPQ9BY79 579 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 TRIT1Q9H3H1 467 aaKnown RBP13.54□□□□□ -0.24
VDAC3-204ENST00000519072 EPB41L1Q9H4G0 881 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 RMI1Q9H9A7 625 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 TBC1D29Q9UFV1 150 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 IP6K2Q9UHH9 426 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 ANAPC2Q9UJX6 822 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 RPL26L1Q9UNX3 145 aaKnown RBP13.54□□□□□ -0.24
VDAC3-204ENST00000519072 CHKBQ9Y259 395 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 PRKAB1Q9Y478 270 aa13.54□□□□□ -0.24
VDAC3-204ENST00000519072 UTP20O75691 2785 aaKnown RBP13.53□□□□□ -0.24
VDAC3-204ENST00000519072 MATN3O15232 486 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 DLGAP3O95886 979 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 CD48P09326 243 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 F3P13726 295 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 SLC2A4P14672 509 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 CASRP41180 1078 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 ZNF165P49910 485 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 TYRO3Q06418 890 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 CDC20Q12834 499 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 MMRN1Q13201 1228 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 PAFAH1B3Q15102 231 aaKnown RBP13.53□□□□□ -0.24
VDAC3-204ENST00000519072 CRTC2Q53ET0 693 aaPredicted RBP13.53□□□□□ -0.24
VDAC3-204ENST00000519072 HENMT1Q5T8I9 393 aaKnown RBP13.53□□□□□ -0.24
VDAC3-204ENST00000519072 NCBP2-AS2Q69YL0 99 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 LYSMD3Q7Z3D4 306 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 SLC9B2Q86UD5 537 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 C9orf43Q8TAL5 461 aaPredicted RBP13.53□□□□□ -0.24
VDAC3-204ENST00000519072 ARRDC2Q8TBH0 407 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 BTBD6Q96KE9 485 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 BPIFA3Q9BQP9 254 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.53□□□□□ -0.24
VDAC3-204ENST00000519072 NAT10Q9H0A0 1025 aaKnown RBP13.53□□□□□ -0.24
VDAC3-204ENST00000519072 PCDH9Q9HC56 1237 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 APMAPQ9HDC9 416 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 HAUS2Q9NVX0 235 aa13.53□□□□□ -0.24
VDAC3-204ENST00000519072 RBM22Q9NW64 420 aaKnown RBP eCLIP13.53□□□□□ -0.242e-7■■□□□ 12.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms