RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 ERN2Q76MJ5 926 aaKnown RBP5.98□□□□□ -1.45
SQLE-203ENST00000518931 TFAP2DQ7Z6R9 452 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 CNTN4Q8IWV2 1026 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 CCDC65Q8IXS2 484 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 OR4N4Q8N0Y3 316 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 CNTROBQ8N137 903 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 AADATQ8N5Z0 425 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 LINC00469Q8N7U9 141 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 NIPA2Q8N8Q9 360 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 URGCPQ8TCY9 931 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 TEKT4Q8WW24 435 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 CPT1BQ92523 772 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 THRSPQ92748 146 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 CELF1Q92879 486 aaKnown RBP5.98□□□□□ -1.45
SQLE-203ENST00000518931 REXO5Q96IC2 774 aaKnown RBP5.98□□□□□ -1.45
SQLE-203ENST00000518931 ATP6V1G3Q96LB4 118 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 GAL3ST4Q96RP7 486 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 SH3GL1Q99961 368 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 CAPS2Q9BXY5 557 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 RNF26Q9BY78 433 aaPredicted RBP5.98□□□□□ -1.45
SQLE-203ENST00000518931 MRPL1Q9BYD6 325 aaKnown RBP5.98□□□□□ -1.45
SQLE-203ENST00000518931 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.98□□□□□ -1.453e-6■■□□□ 14.1
SQLE-203ENST00000518931 RIBC2Q9H4K1 309 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 KAT14Q9H8E8 782 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 LTB4R2Q9NPC1 389 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 KCNK9Q9NPC2 374 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 SIRT4Q9Y6E7 314 aaPredicted RBP5.98□□□□□ -1.45
SQLE-203ENST00000518931 KIF7Q2M1P5 1343 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 ZBED9Q6R2W3 1325 aa5.98□□□□□ -1.45
SQLE-203ENST00000518931 CFAP65Q6ZU64 1925 aaKnown RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 EME2A4GXA9 379 aaPredicted RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 SLC9B1P1A6NJY1 282 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 F8VZ95 297 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 BCAT2O15382 392 aaPredicted RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 NKX2-8O15522 239 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 SMAD6O43541 496 aaKnown RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 ABCB1P08183 1280 aaPredicted RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 NRIP1P48552 1158 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 NPY4RP50391 375 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 MRPL12P52815 198 aaKnown RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 VCPP55072 806 aaKnown RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 RPL7AP62424 266 aaKnown RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 GHRHRQ02643 423 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 ELP6Q0PNE2 266 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 TUBB2AQ13885 445 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 HADHQ16836 314 aaKnown RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 ANKRD20A4Q4UJ75 823 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 ANKRD20A8PQ5CZ79 823 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 ZRANB3Q5FWF4 1079 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 ANKRD20A2Q5SQ80 823 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 TTC22Q5TAA0 569 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 CYP4A22Q5TCH4 519 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 ANKRD20A1Q5TYW2 823 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 ANKRD20A3Q5VUR7 823 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 CST9LP1Q5W188 147 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 ZNF626Q68DY1 528 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 NCEH1Q6PIU2 408 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 SUSD1Q6UWL2 747 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 LRIG3Q6UXM1 1119 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 MARK2Q7KZI7 788 aaKnown RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 CEP57Q86XR8 500 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 LAS2Q8IYD9 372 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 KRT222Q8N1A0 295 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 MRPS27Q92552 414 aaKnown RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 STAMQ92783 540 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 SPACA9Q96E40 222 aaPredicted RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 ERO1AQ96HE7 468 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 TCEANC2Q96MN5 208 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 CFAP57Q96MR6 1250 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 MECRQ9BV79 373 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 TUBB2BQ9BVA1 445 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 TM2D2Q9BX73 214 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 HEMGNQ9BXL5 484 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 TTC12Q9H892 705 aaPredicted RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 TMOD2Q9NZR1 351 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 AGO2Q9UKV8 859 aaKnown RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 RAB21Q9UL25 225 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 NFU1Q9UMS0 254 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 PPIEQ9UNP9 301 aaKnown RBP5.97□□□□□ -1.45
SQLE-203ENST00000518931 SLC12A4Q9UP95 1085 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 CNTN6Q9UQ52 1028 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 B3GNT3Q9Y2A9 372 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 KCNE2Q9Y6J6 123 aa5.97□□□□□ -1.45
SQLE-203ENST00000518931 TRBC2A0A5B9 178 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 XKRY2A2RUG3 117 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 WDR91A4D1P6 747 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 FAM90A18PA6NE21 464 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 FAM90A16PA6NEW6 464 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 FAM90A9PA6NNJ1 464 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 EFCAB8A8MWE9 144 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 FAM90A5PA8MXJ8 464 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 STX16-NPEPL1H3BU86 382 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 STX16O14662 325 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 CASC3O15234 703 aaKnown RBP5.96□□□□□ -1.46
SQLE-203ENST00000518931 CYTIPO60759 359 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 PPP6R2O75170 966 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 TULP3O75386 442 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 BCAR3O75815 825 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 KAT7O95251 611 aa5.96□□□□□ -1.46
SQLE-203ENST00000518931 SMC2O95347 1197 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms