RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 A6NNZ2 444 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 SMAPO00193 183 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 VILLO15195 856 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 INPP4BO15327 924 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 SGTAO43765 313 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 MTX2O75431 263 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 SRP72O76094 671 aaKnown RBP11.74□□□□□ -0.53
AP3B1-203ENST00000517940 SLU7O95391 586 aaKnown RBP11.74□□□□□ -0.53
AP3B1-203ENST00000517940 PRAMEF1O95521 474 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 GOT2P00505 430 aaKnown RBP11.74□□□□□ -0.53
AP3B1-203ENST00000517940 RETP07949 1114 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 TSHRP16473 764 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 NFKBIAP25963 317 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 CD38P28907 300 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 HOXD12P35452 270 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 CTSKP43235 329 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 NXPH1P58417 271 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 KIAA1024LP59773 190 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 EIF2B5Q13144 721 aaKnown RBP11.74□□□□□ -0.53
AP3B1-203ENST00000517940 NFATC2Q13469 925 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 PDE1CQ14123 709 aaPredicted RBP11.74□□□□□ -0.53
AP3B1-203ENST00000517940 KIF19Q2TAC6 998 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 BBS9Q3SYG4 887 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 ANKRD20A4Q4UJ75 823 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 RAET1GQ6H3X3 334 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 PSAPL1Q6NUJ1 521 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 TRMT10BQ6PF06 316 aaKnown RBP11.74□□□□□ -0.53
AP3B1-203ENST00000517940 SLC23A3Q6PIS1 610 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 PTAR1Q7Z6K3 402 aaPredicted RBP11.74□□□□□ -0.53
AP3B1-203ENST00000517940 SPNS2Q8IVW8 549 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 PPHLN1Q8NEY8 458 aaKnown RBP11.74□□□□□ -0.53
AP3B1-203ENST00000517940 OR2I1PQ8NGU4 316 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 OR1E3Q8WZA6 343 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 PEX13Q92968 403 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 EBNA1BP2Q99848 306 aaKnown RBP11.74□□□□□ -0.53
AP3B1-203ENST00000517940 APOOQ9BUR5 198 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 SPATA16Q9BXB7 569 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 FRMD8Q9BZ67 464 aaPredicted RBP11.74□□□□□ -0.53
AP3B1-203ENST00000517940 TCEAL2Q9H3H9 227 aaPredicted RBP11.74□□□□□ -0.53
AP3B1-203ENST00000517940 FGF22Q9HCT0 170 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 AASDHPPTQ9NRN7 309 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 SMOXQ9NWM0 555 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 SLC17A6Q9P2U8 582 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 CHMP2BQ9UQN3 213 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 PCDHGA5Q9Y5G8 931 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 SNX11Q9Y5W9 270 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 ST14Q9Y5Y6 855 aa11.74□□□□□ -0.53
AP3B1-203ENST00000517940 ASCC3Q8N3C0 2202 aaKnown RBP11.74□□□□□ -0.53
AP3B1-203ENST00000517940 GLYATL1P3A0A0U1RQE8 302 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 GOLGA8KD6RF30 607 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 GOLGA8TH3BQL2 631 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 FPGTO14772 594 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 LMNAP02545 664 aaKnown RBP11.73□□□□□ -0.53
AP3B1-203ENST00000517940 CEACAM5P06731 702 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 HOXC4P09017 264 aaPredicted RBP11.73□□□□□ -0.53
AP3B1-203ENST00000517940 FAM153BP0C7A2 387 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 THEGLP0DJG4 465 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 MC4RP32245 332 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 TNNT3P45378 269 aaPredicted RBP11.73□□□□□ -0.53
AP3B1-203ENST00000517940 POLD2P49005 469 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 AFF3P51826 1226 aaKnown RBP11.73□□□□□ -0.53
AP3B1-203ENST00000517940 ARL4CP56559 192 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 GPX6P59796 221 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 IRX4P78413 519 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 GRIK2Q13002 908 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 PDIA2Q13087 525 aaKnown RBP11.73□□□□□ -0.53
AP3B1-203ENST00000517940 CALCOCO2Q13137 446 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 CRYMQ14894 314 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 NFATC4Q14934 902 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 SF3A2Q15428 464 aaKnown RBP11.73□□□□□ -0.53
AP3B1-203ENST00000517940 FAM153CQ494X1 144 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 KIAA0930Q6ICG6 404 aaPredicted RBP11.73□□□□□ -0.53
AP3B1-203ENST00000517940 UNC5AQ6ZN44 842 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 LDB1Q86U70 411 aaPredicted RBP11.73□□□□□ -0.53
AP3B1-203ENST00000517940 IQCHQ86VS3 1027 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 ANKMY2Q8IV38 441 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 BBOF1Q8ND07 529 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 BTN2A2Q8WVV5 523 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 GLYATL1Q969I3 302 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 ZNF669Q96BR6 464 aaPredicted RBP11.73□□□□□ -0.53
AP3B1-203ENST00000517940 STAMBPL1Q96FJ0 436 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 PDXPQ96GD0 296 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 SCARF2Q96GP6 870 aaPredicted RBP11.73□□□□□ -0.53
AP3B1-203ENST00000517940 VPS35Q96QK1 796 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 BOCQ9BWV1 1114 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 C1QTNF7Q9BXJ2 289 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 TXLNGYQ9BZA5 131 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 PHACTR1Q9C0D0 580 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 WDR26Q9H7D7 661 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 IL21RQ9HBE5 538 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 MRPL40Q9NQ50 206 aaKnown RBP11.73□□□□□ -0.53
AP3B1-203ENST00000517940 ANKRD6Q9Y2G4 727 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 PKP3Q9Y446 797 aa11.73□□□□□ -0.53
AP3B1-203ENST00000517940 ARHGEF17Q96PE2 2063 aaPredicted RBP11.72□□□□□ -0.53
AP3B1-203ENST00000517940 IGLV3-16A0A075B6K0 115 aa11.72□□□□□ -0.53
AP3B1-203ENST00000517940 SPTY2D1-AS1A0A0U1RR47 76 aa11.72□□□□□ -0.53
AP3B1-203ENST00000517940 LNP1A1A4G5 178 aa11.72□□□□□ -0.53
AP3B1-203ENST00000517940 AP3B1O00203 1094 aa11.72□□□□□ -0.53
AP3B1-203ENST00000517940 TLR4O00206 839 aa11.72□□□□□ -0.53
AP3B1-203ENST00000517940 DNAJC6O75061 913 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms