RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 PRR23BQ6ZRT6 265 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 CENPUQ71F23 418 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 NLRP9Q7RTR0 991 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 TRIM74Q86UV6 250 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 CCDC25Q86WR0 208 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 SPATS2Q86XZ4 545 aaKnown RBP9.82□□□□□ -0.84
CLN8-202ENST00000517514 RELL1Q8IUW5 271 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 ZBED8Q8IZ13 594 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 TRAM1L1Q8N609 369 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 EIF1ADQ8N9N8 165 aaKnown RBP9.82□□□□□ -0.84
CLN8-202ENST00000517514 OR13H1Q8NG92 308 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 ZNF398Q8TD17 642 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 ZNF669Q96BR6 464 aaPredicted RBP9.82□□□□□ -0.84
CLN8-202ENST00000517514 SGSM3Q96HU1 749 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 C9orf72Q96LT7 481 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 PHOX2BQ99453 314 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 FMO2Q99518 471 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 APOOQ9BUR5 198 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 PARD6BQ9BYG5 372 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 KCNH6Q9H252 994 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 EPB41L4BQ9H329 900 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 ARFGAP3Q9NP61 516 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 FSCN3Q9NQT6 498 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 SMYD2Q9NRG4 433 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 NINJ2Q9NZG7 142 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 RAB21Q9UL25 225 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 SMG5Q9UPR3 1016 aaKnown RBP9.82□□□□□ -0.84
CLN8-202ENST00000517514 PKP3Q9Y446 797 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 RPS6KL1Q9Y6S9 549 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 ZFC3H1O60293 1989 aaKnown RBP9.82□□□□□ -0.84
CLN8-202ENST00000517514 KNL1Q8NG31 2342 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 OTOGLQ3ZCN5 2332 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 TMEM202A6NGA9 273 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 INPP4BO15327 924 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 BCAT2O15382 392 aaPredicted RBP9.81□□□□□ -0.84
CLN8-202ENST00000517514 SGTAO43765 313 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 VAPBO95292 243 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 HOXC4P09017 264 aaPredicted RBP9.81□□□□□ -0.84
CLN8-202ENST00000517514 TSHRP16473 764 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 SSTR1P30872 391 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 HADHAP40939 763 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 CSNK1EP49674 416 aaKnown RBP9.81□□□□□ -0.84
CLN8-202ENST00000517514 RACK1P63244 317 aaKnown RBP9.81□□□□□ -0.84
CLN8-202ENST00000517514 TUBB4BP68371 445 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 CDK3Q00526 305 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 B4GALNT1Q00973 533 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 NFATC2Q13469 925 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 LAMB3Q13751 1172 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 PDE1CQ14123 709 aaPredicted RBP9.81□□□□□ -0.84
CLN8-202ENST00000517514 ELF2Q15723 593 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 DBN1Q16643 649 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 WDR45BQ5MNZ6 344 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 PLA2G2CQ5R387 149 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 RAET1GQ6H3X3 334 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 CASC4Q6P4E1 433 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 Q6ZSR6 202 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 LDB1Q86U70 411 aaPredicted RBP9.81□□□□□ -0.84
CLN8-202ENST00000517514 HEATR4Q86WZ0 1026 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 SYT12Q8IV01 421 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 RGL4Q8IZJ4 473 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 MFSD2AQ8NA29 543 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 NAT14Q8WUY8 206 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 BTN2A2Q8WVV5 523 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 UBXN4Q92575 508 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 RUBCNQ92622 972 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 PIGKQ92643 395 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 CFAP36Q96G28 342 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 VPS35Q96QK1 796 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 SPATA16Q9BXB7 569 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 CDH19Q9H159 772 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 MIR1-1HGQ9H1L0 117 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 SEMA4AQ9H3S1 761 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 SMOC1Q9H4F8 434 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 LRRC4CQ9HCJ2 640 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 RAD18Q9NS91 495 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 SMOXQ9NWM0 555 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 KCTD5Q9NXV2 234 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 MOCS1Q9NZB8 636 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 SLC17A6Q9P2U8 582 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 ZC3H7BQ9UGR2 993 aaKnown RBP9.81□□□□□ -0.84
CLN8-202ENST00000517514 KLF15Q9UIH9 416 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.81□□□□□ -0.84
CLN8-202ENST00000517514 ZNF292O60281 2723 aa9.81□□□□□ -0.84
CLN8-202ENST00000517514 IGLV3-16A0A075B6K0 115 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 A0A1B0GVT2 93 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 A6NNZ2 444 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 CXorf49A8MYA2 514 aaPredicted RBP9.8□□□□□ -0.84
CLN8-202ENST00000517514 FPGTO14772 594 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 CTIFO43310 598 aaKnown RBP9.8□□□□□ -0.84
CLN8-202ENST00000517514 MTX2O75431 263 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 PIAS1O75925 651 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 CEACAM5P06731 702 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 POLBP06746 335 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 THEGLP0DJG4 465 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 ERVK-10P10266 1014 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 TGM1P22735 817 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 GABRB3P28472 473 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 CD38P28907 300 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 GPR1P46091 355 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 POLD2P49005 469 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms