RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 YIPF2Q9BWQ6 316 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 AP1M1Q9BXS5 423 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 HDAC8Q9BY41 377 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 FRMD8P1Q9BZ68 369 aaPredicted RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 DUSP15Q9H1R2 295 aaPredicted RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SLC25A51Q9H1U9 297 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 C6orf106Q9H6K1 298 aaPredicted RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 GLOD4Q9HC38 313 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 KCND1Q9NSA2 647 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 GFOD1Q9NXC2 390 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 USP36Q9P275 1121 aaKnown RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 DKK3Q9UBP4 350 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 AMACRQ9UHK6 382 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 TRHDEQ9UKU6 1024 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 DNPEPQ9ULA0 475 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 MKL2Q9ULH7 1088 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 FZD4Q9ULV1 537 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SNX12Q9UMY4 172 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CHKBQ9Y259 395 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ZKSCAN5Q9Y2L8 839 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 RAI2Q9Y5P3 530 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ZNF318Q5VUA4 2279 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 GON4LQ3T8J9 2241 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 GOLGA6L10A0A0M3HER8 536 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 A0A1W2PQ67 120 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 MEI4A8MW99 385 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PGRMC1O00264 195 aaKnown RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SLC31A1O15431 190 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SLC7A4O43246 635 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PLRG1O43660 514 aaKnown RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 LIASO43766 372 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PMPCBO75439 489 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ZNF189O75820 626 aaPredicted RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PAK4O96013 591 aaPredicted RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 MT-CYBP00156 380 aaPredicted RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CPP00450 1065 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 IGLV3-19P01714 112 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 LMNAP02545 664 aaKnown RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PDHA1P08559 390 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ETS1P14921 441 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PRLRP16471 622 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CTPS1P17812 591 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CA4P22748 312 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 NFKBIAP25963 317 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 MAT2AP31153 395 aaKnown RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 NBL1P41271 181 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PTGER3P43115 390 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 TNNT3P45378 269 aaPredicted RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ADPRHP54922 357 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 TRAF2Q12933 501 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PRPSAP1Q14558 356 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ZNF460Q14592 562 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PRSS53Q2L4Q9 553 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ANKRD20A2Q5SQ80 823 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SYCP2LQ5T4T6 812 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PIP5KL1Q5T9C9 394 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ANKRD20A1Q5TYW2 823 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 AGBL4Q5VU57 503 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ANKRD20A3Q5VUR7 823 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PAPD7Q5XG87 772 aaKnown RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PMS2CLQ68D20 193 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ITPRIPL1Q6GPH6 555 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ERAP2Q6P179 960 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 BRAT1Q6PJG6 821 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ARHGEF18Q6ZSZ5 1173 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ABCA7Q8IZY2 2146 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 RASGEF1CQ8N431 466 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CCDC89Q8N998 374 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 LPCAT1Q8NF37 534 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CADM4Q8NFZ8 388 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SPATA22Q8NHS9 363 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CCDC110Q8TBZ0 833 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ACTRT1Q8TDG2 376 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CXorf40AQ8TE69 158 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PIGKQ92643 395 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 KLK6Q92876 244 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 NKD2Q969F2 451 aaPredicted RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 RAB7BQ96AH8 199 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 RMDN1Q96DB5 314 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 IMP4Q96G21 291 aaKnown RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ZC3H10Q96K80 434 aaKnown RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 C16orf45Q96MC5 204 aaPredicted RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SPATA13Q96N96 652 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 FCRL5Q96RD9 977 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 UBL7Q96S82 380 aaPredicted RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SEMA4AQ9H3S1 761 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 USP29Q9HBJ7 922 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 HOMER3Q9NSC5 361 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PRR13Q9NZ81 148 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SMARCAL1Q9NZC9 954 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 FAM153AQ9UHL3 310 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 RSPH14Q9UHP6 348 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 GMEB2Q9UKD1 530 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 TPX2Q9ULW0 747 aaKnown RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PHTF1Q9UMS5 762 aa5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 DRG1Q9Y295 367 aaKnown RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 GPR55Q9Y2T6 319 aaPredicted RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SF3B6Q9Y3B4 125 aaKnown RBP5.82□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CHD5Q8TDI0 1954 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms