RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 LDHAP00338 332 aaKnown RBP2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 HMGB1P09429 215 aaKnown RBP2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 NR2F2P24468 414 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 HOXA13P31271 388 aaPredicted RBP2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 CDAP32320 146 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 PAFAH1B1P43034 410 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 NEXNQ0ZGT2 675 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 MAD2L1Q13257 205 aaPredicted RBP2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 DCTN2Q13561 401 aaKnown RBP2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 GRAMD1BQ3KR37 738 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 WDR38Q5JTN6 314 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 ZNF497Q6ZNH5 498 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 C15orf39Q6ZRI6 1047 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 LYG1Q8N1E2 194 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 OR5R1Q8NH85 324 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 HMGCLL1Q8TB92 370 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 WDR20Q8TBZ3 569 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 SLC38A5Q8WUX1 472 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 APBB2Q92870 758 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 TAAR8Q969N4 342 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 KLHL29Q96CT2 875 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 PABPC5Q96DU9 382 aaKnown RBP2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 GRAMD2BQ96HH9 432 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 APOPT1Q96IL0 206 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 RPS6KC1Q96S38 1066 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 HERPUD2Q9BSE4 406 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 FUZQ9BT04 418 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 GPR63Q9BZJ6 419 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 USP44Q9H0E7 712 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 RANBP17Q9H2T7 1088 aaKnown RBP2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 PRKRIP1Q9H875 184 aaPredicted RBP2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 SLC52A3Q9NQ40 469 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 KCND2Q9NZV8 630 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 SLC25A10Q9UBX3 287 aaPredicted RBP2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 CACNA1FO60840 1977 aa2.67□□□□□ -1.98
RNU6-1088P-201ENST00000516850 CTAGE9A4FU28 777 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 SH2B2O14492 632 aaPredicted RBP2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 EIF3DO15371 548 aaKnown RBP eCLIP2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 BUD23O43709 281 aaKnown RBP2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 ZNF500O60304 480 aaPredicted RBP2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 CTSVO60911 334 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 FTCDO95954 541 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 CTAGE8P0CG41 777 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 CSF2RAP15509 400 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 ARCN1P48444 511 aaKnown RBP2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 CTCFP49711 727 aaPredicted RBP2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 IRX1P78414 480 aaPredicted RBP2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 ACVR2BQ13705 512 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 DECR1Q16698 335 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 SLC9B1Q4ZJI4 515 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 C18orf63Q68DL7 685 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 LDHAL6AQ6ZMR3 332 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 QSOX2Q6ZRP7 698 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 TRPT1Q86TN4 253 aaKnown RBP2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 GTSCR1Q86UQ5 136 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 CTAGE4Q8IX94 777 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 CCDC13Q8IYE1 715 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 ADSSL1Q8N142 457 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 BEST3Q8N1M1 668 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 HERVK_113Q902F9 699 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 SAAL1Q96ER3 474 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 ABHD8Q96I13 439 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 MAELQ96JY0 434 aaKnown RBP2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 ZNF599Q96NL3 588 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 SEBOXQ9HB31 216 aaPredicted RBP2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 SLC6A13Q9NSD5 602 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 HAO1Q9UJM8 370 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 TBX20Q9UMR3 447 aa2.66□□□□□ -1.98
RNU6-1088P-201ENST00000516850 ANKRD66B4E2M5 251 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 EIF3CLB5ME19 914 aaKnown RBP2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 EIF3FO00303 357 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 NR5A2O00482 541 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 KCNN4O15554 427 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PDE9AO76083 593 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PRSS56P0CW18 603 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZNF182P17025 639 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 NR1D1P20393 614 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 HOXC9P31274 260 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 GGT5P36269 586 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CPOXP36551 454 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 HALP42357 657 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 NR2C2P49116 596 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CCR5P51681 352 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 LUMP51884 338 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 GNB1P62873 340 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 COG7P83436 770 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TLE2Q04725 743 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TRPC3Q13507 836 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ITGA9Q13797 1035 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 FGFBP1Q14512 234 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 COL28A1Q2UY09 1125 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TECRLQ5HYJ1 363 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZNF280DQ6N043 979 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZNF790Q6PG37 636 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 RBMS3Q6XE24 437 aaKnown RBP2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 LRRTM4Q86VH4 590 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CPOQ8IVL8 374 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PPP4R1Q8TF05 950 aa2.65□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TMEM190Q8WZ59 177 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms