RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 CCDC85BQ15834 202 aaPredicted RBP10.18□□□□□ -0.78
SMG7-215ENST00000515829 TIGD5Q53EQ6 642 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 SDE2Q6IQ49 451 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 DRAXINQ8NBI3 349 aaPredicted RBP10.18□□□□□ -0.78
SMG7-215ENST00000515829 ATAD1Q8NBU5 361 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 OR2T12Q8NG77 320 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 CRTAC1Q9NQ79 661 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 IMPAD1Q9NX62 359 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 UBAP1Q9NZ09 502 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 OPTCQ9UBM4 332 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 MAGEB3O15480 346 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 DENRO43583 198 aaKnown RBP10.18□□□□□ -0.78
SMG7-215ENST00000515829 CBFA2T3O75081 653 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 ARSAP15289 507 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 HOXB8P17481 243 aaPredicted RBP10.18□□□□□ -0.78
SMG7-215ENST00000515829 CTPS1P17812 591 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 ITGALP20701 1170 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 MAGP20916 626 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 CDH3P22223 829 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 ALDH4A1P30038 563 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 ANXA11P50995 505 aaKnown RBP10.18□□□□□ -0.78
SMG7-215ENST00000515829 SIM2Q14190 667 aaPredicted RBP10.18□□□□□ -0.78
SMG7-215ENST00000515829 CARTPTQ16568 116 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 ZNF621Q6ZSS3 439 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 C12orf43Q96C57 262 aaKnown RBP10.18□□□□□ -0.78
SMG7-215ENST00000515829 PLK2Q9NYY3 685 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 COL2A1P02458 1487 aaPredicted RBP10.18□□□□□ -0.78
SMG7-215ENST00000515829 PDE4DIPQ5VU43 2346 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 CARNS1A5YM72 827 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 TBX18O95935 607 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 MC4RP32245 332 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 S100A3P33764 101 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 CPSF6Q16630 551 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMG7-215ENST00000515829 AP5B1Q2VPB7 878 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 TRIM74Q86UV6 250 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 TRIM73Q86UV7 250 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 SLC44A2Q8IWA5 706 aaPredicted RBP10.18□□□□□ -0.78
SMG7-215ENST00000515829 ADHFE1Q8IWW8 467 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 LRRC58Q96CX6 371 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 BBS2Q9BXC9 721 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 PRORSD1PA6NEY8 169 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 ZNF37AP17032 561 aaPredicted RBP10.18□□□□□ -0.78
SMG7-215ENST00000515829 EDNRBP24530 442 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 RPL10P27635 214 aaKnown RBP10.18□□□□□ -0.78
SMG7-215ENST00000515829 CAPGP40121 348 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 GNA12Q03113 381 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 PCBP1Q15365 356 aaKnown RBP eCLIP10.18□□□□□ -0.782e-7■■□□□ 14
SMG7-215ENST00000515829 OGFOD2Q6N063 350 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 FAM117BQ6P1L5 589 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 CRTC3Q6UUV7 619 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 BBS7Q8IWZ6 715 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 RTL3Q8N8U3 475 aaKnown RBP10.18□□□□□ -0.78
SMG7-215ENST00000515829 SPPL2AQ8TCT8 520 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 KBTBD7Q8WVZ9 684 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 TM6SF2Q9BZW4 377 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 EIF2B4Q9UI10 523 aaKnown RBP10.18□□□□□ -0.78
SMG7-215ENST00000515829 SH3GLB1Q9Y371 365 aa10.18□□□□□ -0.78
SMG7-215ENST00000515829 LRRC14BA6NHZ5 514 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 ZNF487B1APH4 448 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 AURKAO14965 403 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 RGS14O43566 566 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 RPP40O75818 363 aaKnown RBP10.17□□□□□ -0.78
SMG7-215ENST00000515829 CD68P34810 354 aaPredicted RBP10.17□□□□□ -0.78
SMG7-215ENST00000515829 HERVK_113P63132 956 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 C11orf74Q86VG3 221 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 CASP10Q92851 521 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 PRICKLE1Q96MT3 831 aaPredicted RBP10.17□□□□□ -0.78
SMG7-215ENST00000515829 SLC29A1Q99808 456 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 ERVK-6Q9BXR3 956 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 ABCB10Q9NRK6 738 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 GMIPQ9P107 970 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 ADAMTS5Q9UNA0 930 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 SHANK3Q9BYB0 1731 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 LOC100506127A0A0U1RQW1 187 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 ARL5CA6NH57 179 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 STK25O00506 426 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 PIRO00625 290 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 FGF1P05230 155 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 GLDCP23378 1020 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 PAX3P23760 479 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 GGT5P36269 586 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 MAGEA6P43360 314 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 RPL26P61254 145 aaKnown RBP10.17□□□□□ -0.78
SMG7-215ENST00000515829 MYBPC1Q00872 1141 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 DGUOKQ16854 277 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 PAQR3Q6TCH7 311 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 TRIM69Q86WT6 500 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 LRRC49Q8IUZ0 686 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 PSMA8Q8TAA3 256 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 PALMDQ9NP74 551 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 ATAD3AQ9NVI7 634 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 TMEM161AQ9NX61 479 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 DPP7Q9UHL4 492 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 CCDC162PA2VCL2 907 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 ULK1O75385 1050 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 KRT6AP02538 564 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 KRT6BP04259 564 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 THRBP10828 461 aa10.17□□□□□ -0.78
SMG7-215ENST00000515829 ZNF7P17097 686 aaPredicted RBP10.17□□□□□ -0.78
SMG7-215ENST00000515829 JAK1P23458 1154 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms