RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 APPL1Q9UKG1 709 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 B3GNT3Q9Y2A9 372 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 CPQQ9Y646 472 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 CEP350Q5VT06 3117 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 SYNJ2BP-COX16A0A087WUM0 186 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 MEI4A8MW99 385 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 KBTBD13C9JR72 458 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 UBXN8O00124 270 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 GNB5O14775 395 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 MDM4O15151 490 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 EDF1O60869 148 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 TSHRP16473 764 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 PMLP29590 882 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 HOXC12P31275 282 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 ELK3P41970 407 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 ATXN1P54253 815 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 AQP4P55087 323 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 OVGP1Q12889 678 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 SFT2D3Q587I9 215 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 FAM47CQ5HY64 1035 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 GLRA4Q5JXX5 417 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 CDKL4Q5MAI5 379 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC27A1Q6PCB7 646 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 METTL23Q86XA0 190 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 BANPQ8N9N5 519 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 URGCPQ8TCY9 931 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF398Q8TD17 642 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 TMEM40Q8WWA1 233 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 TMEM80Q96HE8 168 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 TMEM246Q9BRR3 403 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 CADM1Q9BY67 442 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 MROQ9BYG7 248 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 TLE6Q9H808 572 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 SMYD2Q9NRG4 433 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 IARS2Q9NSE4 1012 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 DDX28Q9NUL7 540 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 MTMR10Q9NXD2 777 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 SIRPGQ9P1W8 387 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 MBD1Q9UIS9 605 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 PNMA8BQ9ULN7 279 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 PHTF1Q9UMS5 762 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 TRBV23OR9-2A0A075B6M9 112 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 A0A1B0GTQ1 180 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 TCRBV9S1A1TA0A576 114 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 CHADO15335 359 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 PRPSAP2O60256 369 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 TGM2P21980 687 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 MAGEA6P43360 314 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 STARP49675 285 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 YWHAZP63104 245 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 PDK2Q15119 407 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 LRIT3Q3SXY7 679 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 FSCBQ5H9T9 825 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 C9orf57Q5W0N0 161 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 ARHGAP17Q68EM7 881 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 SULT1C3Q6IMI6 304 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 DARS2Q6PI48 645 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF534Q76KX8 674 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 LIMS2Q7Z4I7 341 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 LNX2Q8N448 690 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 OR6J1Q8NGC5 347 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 TBC1D15Q8TC07 691 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 CENPIQ92674 756 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 HLA-CQ95604 372 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC10A4Q96EP9 437 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 ADPRHL2Q9NX46 363 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 DNAJB4Q9UDY4 337 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 CPA4Q9UI42 421 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 DCTN4Q9UJW0 460 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 MBLAC1A4D2B0 266 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF839A8K0R7 811 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 PIRO00625 290 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 DAB1O75553 588 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 F2P00734 622 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 APOC1P02654 83 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 RB1P06400 928 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 ADRA1DP25100 572 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 G0S2P27469 103 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 RBL1P28749 1068 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 GARSP41250 739 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC10A2Q12908 348 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 IQCCQ4KMZ1 466 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 TOR2AQ5JU69 321 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 CCDC149Q6ZUS6 474 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 PDIK1LQ8N165 341 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 LRRC52Q8N7C0 313 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 SIMC1Q8NDZ2 872 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 OR52N1Q8NH53 320 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 C10orf82Q8WW14 230 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 TESCQ96BS2 214 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 MTBPQ96DY7 904 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 OSMRQ99650 979 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 MIPEPQ99797 713 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 PTPN18Q99952 460 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 TINF2Q9BSI4 451 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 TMEM168Q9H0V1 697 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 Q9H521 79 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 MVB12BQ9H7P6 319 aa7.45□□□□□ -1.22
PDLIM5-219ENST00000514743 RPRD1BQ9NQG5 326 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms