RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 UGT1A4P22310 534 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 UGT1A3P35503 534 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 UGT1A5P35504 534 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 ABCE1P61221 599 aaKnown RBP12.77□□□□□ -0.37
PVT1-203ENST00000513868 ST8SIA6P61647 398 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 PFKPQ01813 784 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 ZNF234Q14588 700 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 ACAP2Q15057 778 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 HNRNPA1L2Q32P51 320 aaKnown RBP12.77□□□□□ -0.37
PVT1-203ENST00000513868 GLIPR1L2Q4G1C9 344 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 C9orf64Q5T6V5 341 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 LIPMQ5VYY2 423 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 PAQR3Q6TCH7 311 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 CERS6Q6ZMG9 384 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 FITM2Q8N6M3 262 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 TXNDC5Q8NBS9 432 aaKnown RBP12.77□□□□□ -0.37
PVT1-203ENST00000513868 HCAR2Q8TDS4 363 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 PTERQ96BW5 349 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 FAM136AQ96C01 138 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 RIPOR3Q96MK2 946 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 GPR21Q99679 349 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 PLCD4Q9BRC7 762 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 TTYH1Q9H313 450 aaPredicted RBP12.77□□□□□ -0.37
PVT1-203ENST00000513868 KDM4CQ9H3R0 1056 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 TAS2R13Q9NYV9 303 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 FAM50BQ9Y247 325 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 NUMBLQ9Y6R0 609 aa12.77□□□□□ -0.37
PVT1-203ENST00000513868 SPTBN5Q9NRC6 3674 aaKnown RBP12.76□□□□□ -0.37
PVT1-203ENST00000513868 MYO10Q9HD67 2058 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 UPK3BL1B0FP48 263 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 UPK3BL2E5RIL1 263 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 ANKRD65E5RJM6 399 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 H3BMM5 538 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 PFDN6O15212 129 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 ZBTB14O43829 449 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 NIPSNAP2O75323 286 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 ECI2O75521 394 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 RHOBTB1O94844 696 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 ESR1P03372 595 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 HLA-EP13747 358 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 KCNA5P22460 613 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 ACRV1P26436 265 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 GDI1P31150 447 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 EIF2DP41214 584 aaKnown RBP12.76□□□□□ -0.37
PVT1-203ENST00000513868 MTHFRP42898 656 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 SPINT3P49223 89 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 KPNA2P52292 529 aaKnown RBP12.76□□□□□ -0.37
PVT1-203ENST00000513868 RALGDSQ12967 914 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 ADGRE1Q14246 886 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 GPR33Q49SQ1 333 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 CRLF3Q8IUI8 442 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 YAF2Q8IY57 180 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 STK40Q8N2I9 435 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 GIMAP7Q8NHV1 300 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 BOCQ9BWV1 1114 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 CCDC68Q9H2F9 335 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 PCDH12Q9NPG4 1184 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 ACSS2Q9NR19 701 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 COMMD10Q9Y6G5 202 aa12.76□□□□□ -0.37
PVT1-203ENST00000513868 DOCK9Q9BZ29 2069 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 EDDM13A0A1B0GTR0 161 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 NEMP2A6NFY4 417 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 C16orf96A6NNT2 1141 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 TMEM114B3SHH9 223 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 PRMT5O14744 637 aaPredicted RBP12.75□□□□□ -0.37
PVT1-203ENST00000513868 H2AFYO75367 372 aaKnown RBP12.75□□□□□ -0.37
PVT1-203ENST00000513868 KAT7O95251 611 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 TSPAN12O95859 305 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 RBP1P09455 135 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 ZNF30P17039 623 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 TFEBP19484 476 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 POU3F3P20264 500 aaPredicted RBP12.75□□□□□ -0.37
PVT1-203ENST00000513868 ITGALP20701 1170 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 RPS3P23396 243 aaKnown RBP eCLIP12.75□□□□□ -0.37
PVT1-203ENST00000513868 VIPR1P32241 457 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 METAP1P53582 386 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 PRKAA2P54646 552 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 PDAP1Q13442 181 aaKnown RBP12.75□□□□□ -0.37
PVT1-203ENST00000513868 GRIN2CQ14957 1233 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 POM121L1PQ3SYA9 428 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 GALNTL6Q49A17 601 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 FNDC3BQ53EP0 1204 aaKnown RBP12.75□□□□□ -0.37
PVT1-203ENST00000513868 LACTB2Q53H82 288 aaPredicted RBP12.75□□□□□ -0.37
PVT1-203ENST00000513868 KLC3Q6P597 504 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 PARS2Q7L3T8 475 aaKnown RBP12.75□□□□□ -0.37
PVT1-203ENST00000513868 HSD11B1LQ7Z5J1 315 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 CD200R1Q8TD46 325 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 KCNJ9Q92806 393 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 PBXIP1Q96AQ6 731 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 SGF29Q96ES7 293 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 PLEKHG4BQ96PX9 1271 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 FAM129BQ96TA1 746 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 TRMT61BQ9BVS5 477 aaKnown RBP12.75□□□□□ -0.37
PVT1-203ENST00000513868 TMEM120AQ9BXJ8 343 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 ALG9Q9H6U8 611 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 FBRSL1Q9HCM7 1045 aaKnown RBP12.75□□□□□ -0.37
PVT1-203ENST00000513868 MARCOQ9UEW3 520 aaPredicted RBP12.75□□□□□ -0.37
PVT1-203ENST00000513868 IKZF3Q9UKT9 509 aa12.75□□□□□ -0.37
PVT1-203ENST00000513868 TMPRSS11EQ9UL52 423 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms