RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TSACCQ96A04 125 aaPredicted RBP9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 FAM122AQ96E09 287 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 TBATAQ96M53 351 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 ERP44Q9BS26 406 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 UGT1A7Q9HAW7 530 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 UGT1A10Q9HAW8 530 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 UGT1A8Q9HAW9 530 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 IL26Q9NPH9 171 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 GDF3Q9NR23 364 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 CHRAC1Q9NRG0 131 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 GPR27Q9NS67 375 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 GRHL1Q9NZI5 618 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 IL1RAPL1Q9NZN1 696 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 KLF15Q9UIH9 416 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 MOSPD1Q9UJG1 213 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 TMPRSS11EQ9UL52 423 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 TMEM98Q9Y2Y6 226 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 PCYT1BQ9Y5K3 369 aaPredicted RBP9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 HS3ST3A1Q9Y663 406 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 ZNF292O60281 2723 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 CACNA1EQ15878 2313 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 EP300Q09472 2414 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 HEATR9A2RTY3 570 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 CCDC162PA2VCL2 907 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 MROH6A6NGR9 719 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 CACNB4O00305 520 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 ARHGAP33O14559 1287 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 CELA2BP08218 269 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 MYCLP1P12525 358 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 PLA2G5P39877 138 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 MAGEA3P43357 314 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 ATXN3P54252 364 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 XIAPP98170 497 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 CDK16Q00536 496 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 GUCY2DQ02846 1103 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 DPTQ07507 201 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 DHX9Q08211 1270 aaKnown RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 EIF2B5Q13144 721 aaKnown RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 PEX6Q13608 980 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 TUBB2AQ13885 445 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 FASTKD3Q14CZ7 662 aaKnown RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 MORF4L2Q15014 288 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 SHBQ15464 509 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 ALG11Q2TAA5 492 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 UAP1L1Q3KQV9 507 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 BBS9Q3SYG4 887 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 DUPD1Q68J44 220 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 ADAMTSL4Q6UY14 1074 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 MACC1Q6ZN28 852 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 RD3Q7Z3Z2 195 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 RABEPKQ7Z6M1 372 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 ALYREFQ86V81 257 aaKnown RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 HOOK3Q86VS8 718 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 PARGQ86W56 976 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 GATAD2AQ86YP4 633 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 HID1Q8IV36 788 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 MMGT1Q8N4V1 131 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 TRAM1L1Q8N609 369 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 MCUQ8NE86 351 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 OR13J1Q8NGT2 312 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 ZNF669Q96BR6 464 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 MFSD3Q96ES6 412 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 WDR92Q96MX6 357 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 PLEKHG4BQ96PX9 1271 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 RANBP9Q96S59 729 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 SRPK1Q96SB4 655 aaKnown RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 WDR83Q9BRX9 315 aaKnown RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 TUBB2BQ9BVA1 445 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 TEX101Q9BY14 249 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 IL22Q9GZX6 179 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 GAREM1Q9H706 876 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 ASB8Q9H765 288 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 L2HGDHQ9H9P8 463 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 XAB2Q9HCS7 855 aaKnown RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 PHPT1Q9NRX4 125 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 NLE1Q9NVX2 485 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 DNAJC28Q9NX36 388 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 BFARQ9NZS9 450 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 NFKBIL1Q9UBC1 381 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 KLQ9UEF7 1012 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 DMGDHQ9UI17 866 aaKnown RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 ANAPC5Q9UJX4 755 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 CNOT6Q9ULM6 557 aaKnown RBP9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 CHMP2BQ9UQN3 213 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 PRKAB1Q9Y478 270 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 MAD1L1Q9Y6D9 718 aa9.73□□□□□ -0.85
TOPBP1-209ENST00000513818 TDRD6O60522 2096 aaKnown RBP9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 SPTY2D1-AS1A0A0U1RR47 76 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 RGSL1A5PLK6 1076 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 GOLGA8KD6RF30 607 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 GOLGA8TH3BQL2 631 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 SRP72O76094 671 aaKnown RBP9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 ASMTLO95671 621 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 SYPP08247 313 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 RHOXF2BP0C7M4 288 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 ADRA1DP25100 572 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 GNPDA1P46926 289 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 NPY2RP49146 381 aa9.72□□□□□ -0.85
TOPBP1-209ENST00000513818 PLTPP55058 493 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms