RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.21□□□□□ -0.61
TCOF1-211ENST00000513346 PCDHGA10Q9Y5H3 936 aa11.21□□□□□ -0.61
TCOF1-211ENST00000513346 SNED1Q8TER0 1413 aa11.21□□□□□ -0.61
TCOF1-211ENST00000513346 CKBP12277 381 aa11.21□□□□□ -0.61
TCOF1-211ENST00000513346 PTGS2P35354 604 aa11.21□□□□□ -0.61
TCOF1-211ENST00000513346 CDC42P60953 191 aa11.21□□□□□ -0.61
TCOF1-211ENST00000513346 ZNF773Q6PK81 442 aa11.21□□□□□ -0.61
TCOF1-211ENST00000513346 PAOXQ6QHF9 649 aa11.21□□□□□ -0.61
TCOF1-211ENST00000513346 TIFABQ6ZNK6 161 aa11.21□□□□□ -0.61
TCOF1-211ENST00000513346 LZTR1Q8N653 840 aa11.21□□□□□ -0.61
TCOF1-211ENST00000513346 CD99L2Q8TCZ2 262 aa11.21□□□□□ -0.61
TCOF1-211ENST00000513346 ACTR8Q9H981 624 aa11.21□□□□□ -0.61
TCOF1-211ENST00000513346 SAMHD1Q9Y3Z3 626 aaKnown RBP11.21□□□□□ -0.61
TCOF1-211ENST00000513346 U3KQV3 271 aa11.21□□□□□ -0.61
TCOF1-211ENST00000513346 TSPAN3O60637 253 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 ELNP15502 786 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 PRKCHP24723 683 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 NOS2P35228 1153 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 RAB39AQ14964 217 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 FAM91A1Q658Y4 838 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 BORAQ6PGQ7 559 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 LRRC20Q8TCA0 184 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 H0Y858 1186 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 AOC2O75106 756 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 PRKAR1AP10644 381 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 CCL23P55773 120 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 SCN1BQ07699 218 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 IL18R1Q13478 541 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 DAG1Q14118 895 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 KCNJ11Q14654 390 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 DLG2Q15700 870 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 SCIMPQ6UWF3 145 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 KBTBD6Q86V97 674 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 ZC3H7AQ8IWR0 971 aaKnown RBP11.21□□□□□ -0.62
TCOF1-211ENST00000513346 FSTL5Q8N475 847 aaPredicted RBP11.21□□□□□ -0.62
TCOF1-211ENST00000513346 WNT8BQ93098 351 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 OXSMQ9NWU1 459 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 SPASTQ9UBP0 616 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 EBF1Q9UH73 591 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 ST3GAL5Q9UNP4 418 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 TLL2Q9Y6L7 1015 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 C10orf71Q711Q0 1435 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 MYH2Q9UKX2 1941 aa11.21□□□□□ -0.62
TCOF1-211ENST00000513346 RGPD1P0DJD0 1748 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 MYH15Q9Y2K3 1946 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 FAM220BPB1ANY3 271 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 ZW10O43264 779 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 NPR3P17342 541 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 MYL12AP19105 171 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 IGFBP5P24593 272 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 CRYBB1P53674 252 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-211ENST00000513346 PHKG1Q16816 387 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 NOL9Q5SY16 702 aaKnown RBP11.2□□□□□ -0.62
TCOF1-211ENST00000513346 SLC26A9Q7LBE3 791 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 PEX5LQ8IYB4 626 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 TUBA1CQ9BQE3 449 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 HEPHQ9BQS7 1158 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 ZNF624Q9P2J8 865 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-211ENST00000513346 CNOT11Q9UKZ1 510 aaKnown RBP11.2□□□□□ -0.62
TCOF1-211ENST00000513346 MAPRE3Q9UPY8 281 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 ERVK-11Q9UQG0 969 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 RNASEH2AO75792 299 aaKnown RBP11.2□□□□□ -0.62
TCOF1-211ENST00000513346 CD52P31358 61 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 ELP6Q0PNE2 266 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 DDX39BQ13838 428 aaKnown RBP11.2□□□□□ -0.62
TCOF1-211ENST00000513346 RALGPS2Q86X27 583 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-211ENST00000513346 GPSM1Q86YR5 675 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 SVOPLQ8N434 492 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 TRPV3Q8NET8 790 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 CSPG4P5Q96PW8 444 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 FTHL17Q9BXU8 183 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 ZBTB26Q9HCK0 441 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 ERGIC3Q9Y282 383 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 EFCAB9A8MZ26 197 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 PLK4O00444 970 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 RFPL1O75677 317 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 TCF4P15884 667 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 NCK1P16333 377 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 HNF4AP41235 474 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 PLD1Q13393 1074 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 ANGPT1Q15389 498 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 MED22Q15528 200 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 SMU1Q2TAY7 513 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 TXNRD3NBQ6F5E7 133 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 FAM131AQ6UXB0 335 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 KIAA0408Q6ZU52 694 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 CYP4Z1Q86W10 505 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 FBXO27Q8NI29 283 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 KBTBD7Q8WVZ9 684 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 HSFY1Q96LI6 401 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 PPM1MQ96MI6 270 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 TKTL2Q9H0I9 626 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 RASSF1Q9NS23 344 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 CLN6Q9NWW5 311 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 UXTQ9UBK9 157 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-211ENST00000513346 VWA7Q9Y334 891 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 KDM3BQ7LBC6 1761 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 ABCB7O75027 752 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 LRIG2O94898 1065 aa11.2□□□□□ -0.62
TCOF1-211ENST00000513346 C8BP07358 591 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms