RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 FAM72AQ5TYM5 149 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 MANEALQ5VSG8 457 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 FAM72DQ6L9T8 149 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 LRRC31Q6UY01 552 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 ASB18Q6ZVZ8 466 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 BNIPLQ7Z465 357 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 NLRP14Q86W24 1093 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 FAM72BQ86X60 149 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 FAM131BQ86XD5 332 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 FAM129CQ86XR2 697 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 NLGN4XQ8N0W4 816 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 TEX19Q8NA77 164 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 RNF214Q8ND24 703 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 AGBL5Q8NDL9 886 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 ZNF397Q8NF99 534 aaPredicted RBP12.26□□□□□ -0.45
SDHA-215ENST00000512962 NLGN4YQ8NFZ3 816 aaPredicted RBP12.26□□□□□ -0.45
SDHA-215ENST00000512962 OR56A4Q8NGH8 313 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 CCDC34Q96HJ3 373 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 C1orf74Q96LT6 269 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 OSBPL1AQ9BXW6 950 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 INTS2Q9H0H0 1204 aaKnown RBP12.26□□□□□ -0.45
SDHA-215ENST00000512962 MRPL18Q9H0U6 180 aaKnown RBP12.26□□□□□ -0.45
SDHA-215ENST00000512962 CYP4F12Q9HCS2 524 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 LHX3Q9UBR4 397 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 DNAI1Q9UI46 699 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 MKL2Q9ULH7 1088 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 VPS4AQ9UN37 437 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 CROCCQ5TZA2 2017 aa12.26□□□□□ -0.45
SDHA-215ENST00000512962 WIPF3A6NGB9 483 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 B2RBV5 119 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 B4E171 279 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 TNFRSF10CO14798 259 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 MED7O43513 233 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 POP4O95707 220 aaKnown RBP12.25□□□□□ -0.45
SDHA-215ENST00000512962 PNMA6AP0CW24 399 aaPredicted RBP12.25□□□□□ -0.45
SDHA-215ENST00000512962 MMP12P39900 470 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 TSPAN7P41732 249 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 SNRPD1P62314 119 aaKnown RBP12.25□□□□□ -0.45
SDHA-215ENST00000512962 MTM1Q13496 603 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 EIF2S3LQ2VIR3 472 aaKnown RBP12.25□□□□□ -0.45
SDHA-215ENST00000512962 NADK2Q4G0N4 442 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 C2CD6Q53TS8 623 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 C1QL3Q5VWW1 255 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 TCTN3Q6NUS6 607 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 NRSN1Q8IZ57 195 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 NAGSQ8N159 534 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 OR4D9Q8NGE8 314 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 CPT1CQ8TCG5 803 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 PGAP3Q96FM1 320 aaPredicted RBP12.25□□□□□ -0.45
SDHA-215ENST00000512962 HMCESQ96FZ2 354 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 TTYH3Q9C0H2 523 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 NOL6Q9H6R4 1146 aaKnown RBP12.25□□□□□ -0.45
SDHA-215ENST00000512962 PRDM8Q9NQV8 689 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 AKAP7Q9P0M2 348 aaPredicted RBP12.25□□□□□ -0.45
SDHA-215ENST00000512962 DKK3Q9UBP4 350 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 PLEKHM1Q9Y4G2 1056 aa12.25□□□□□ -0.45
SDHA-215ENST00000512962 TSPAN11A1L157 253 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 RHPN2P1A8MT19 583 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 TIAF1O95411 115 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 DRD2P14416 443 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 CCNB1P14635 433 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 TCN2P20062 427 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 RIPPLY3P57055 190 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 MTA1Q13330 715 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 POLD3Q15054 466 aaPredicted RBP12.24□□□□□ -0.45
SDHA-215ENST00000512962 COBLL1Q53SF7 1204 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 DCAF12Q5T6F0 453 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 UNC5AQ6ZN44 842 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 MAMDC2Q7Z304 686 aaPredicted RBP12.24□□□□□ -0.45
SDHA-215ENST00000512962 MCATQ8IVS2 390 aaKnown RBP12.24□□□□□ -0.45
SDHA-215ENST00000512962 CCDC13Q8IYE1 715 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 GDAP1L1Q96MZ0 367 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 UBE2TQ9NPD8 197 aaPredicted RBP12.24□□□□□ -0.45
SDHA-215ENST00000512962 CASS4Q9NQ75 786 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.24□□□□□ -0.45
SDHA-215ENST00000512962 TAAR2Q9P1P5 351 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 MOSPD1Q9UJG1 213 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 ERRFI1Q9UJM3 462 aaPredicted RBP12.24□□□□□ -0.45
SDHA-215ENST00000512962 TLK1Q9UKI8 766 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 AKAP9Q99996 3911 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 PDZD2O15018 2839 aa12.24□□□□□ -0.45
SDHA-215ENST00000512962 PRSS38A1L453 326 aa12.23□□□□□ -0.45
SDHA-215ENST00000512962 A8MU76 341 aa12.23□□□□□ -0.45
SDHA-215ENST00000512962 BUB1BO60566 1050 aaPredicted RBP12.23□□□□□ -0.45
SDHA-215ENST00000512962 RECQL5O94762 991 aaPredicted RBP12.23□□□□□ -0.45
SDHA-215ENST00000512962 STK17BO94768 372 aa12.23□□□□□ -0.45
SDHA-215ENST00000512962 PRF1P14222 555 aa12.23□□□□□ -0.45
SDHA-215ENST00000512962 ZNF28P17035 718 aa12.23□□□□□ -0.45
SDHA-215ENST00000512962 CSTF2P33240 577 aaKnown RBP eCLIP12.23□□□□□ -0.45
SDHA-215ENST00000512962 STAT5AP42229 794 aa12.23□□□□□ -0.45
SDHA-215ENST00000512962 TRA2AQ13595 282 aaKnown RBP eCLIP12.23□□□□□ -0.45
SDHA-215ENST00000512962 UGP2Q16851 508 aa12.23□□□□□ -0.45
SDHA-215ENST00000512962 CCDC40Q4G0X9 1142 aa12.23□□□□□ -0.45
SDHA-215ENST00000512962 ZNF658Q5TYW1 1059 aaPredicted RBP12.23□□□□□ -0.45
SDHA-215ENST00000512962 SLC30A9Q6PML9 568 aa12.23□□□□□ -0.45
SDHA-215ENST00000512962 C6orf15Q6UXA7 325 aaPredicted RBP12.23□□□□□ -0.45
SDHA-215ENST00000512962 HEATR4Q86WZ0 1026 aa12.23□□□□□ -0.45
SDHA-215ENST00000512962 FAM114A1Q8IWE2 563 aa12.23□□□□□ -0.45
SDHA-215ENST00000512962 AGGF1Q8N302 714 aaeCLIP12.23□□□□□ -0.45
SDHA-215ENST00000512962 FAM13CQ8NE31 585 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms