RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 AP1S1P61966 158 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 IL10RBQ08334 325 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 MAMLD1Q13495 774 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 PEX6Q13608 980 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 ARHGEF7Q14155 803 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 PPP6R3Q5H9R7 873 aaPredicted RBP7.2□□□□□ -1.26
USP46-208ENST00000512656 INO80CQ6PI98 192 aaPredicted RBP7.2□□□□□ -1.26
USP46-208ENST00000512656 CCDC81Q6ZN84 652 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 RFX8Q6ZV50 586 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 DPPA4Q7L190 304 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 RAB11FIP2Q7L804 512 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 TAF8Q7Z7C8 310 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 CAMK1DQ8IU85 385 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 BBS5Q8N3I7 341 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 ZNF843Q8N446 348 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 NETO2Q8NC67 525 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 FAM46DQ8NEK8 389 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 OR56A4Q8NGH8 313 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 FNIP1Q8TF40 1166 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 TMEM159Q96B96 161 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 ECHDC3Q96DC8 303 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 PRR11Q96HE9 360 aaPredicted RBP7.2□□□□□ -1.26
USP46-208ENST00000512656 CELF6Q96J87 481 aaKnown RBP7.2□□□□□ -1.26
USP46-208ENST00000512656 ZNF599Q96NL3 588 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 CCNL2Q96S94 520 aaPredicted RBP7.2□□□□□ -1.26
USP46-208ENST00000512656 RBCK1Q9BYM8 510 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 SLC39A8Q9C0K1 460 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 SEMA6CQ9H3T2 930 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 LRRN3Q9H3W5 708 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 WDR26Q9H7D7 661 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 ZWILCHQ9H900 591 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 AKAP7Q9P0M2 348 aaPredicted RBP7.2□□□□□ -1.26
USP46-208ENST00000512656 PNMA8BQ9ULN7 279 aaPredicted RBP7.2□□□□□ -1.26
USP46-208ENST00000512656 OR1A2Q9Y585 309 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 PCDHGA7Q9Y5G6 932 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 SCINQ9Y6U3 715 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 TMEM238LA0A1B0GVL6 79 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 A0A1W2PNU3 283 aaPredicted RBP7.19□□□□□ -1.26
USP46-208ENST00000512656 TMEM191CA6NGB0 347 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 TMCO5BA8MYB1 307 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 SOCS5O75159 536 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 MBD3O95983 291 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 MYBL1P10243 752 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 GZMAP12544 262 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 PLA2G2AP14555 144 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 ERCC2P18074 760 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 CCKBRP32239 447 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 UGT1A5P35504 534 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 TRIM23P36406 574 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 ARL4AP40617 200 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 SCNN1BP51168 640 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 CCL7P80098 99 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 BIRC2Q13490 618 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 ZNF235Q14590 738 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 ACOX1Q15067 660 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 TCEA2Q15560 299 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 ASIC2Q16515 512 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 ZSCAN23Q3MJ62 389 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 FILIP1LQ4L180 1135 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 BOLA3Q53S33 107 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 CERCAMQ5T4B2 595 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 AFMIDQ63HM1 303 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 PLEKHA7Q6IQ23 1121 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 OGFOD3Q6PK18 319 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 LIPIQ6XZB0 460 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 IRF2BP2Q7Z5L9 587 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 JAMLQ86YT9 394 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 GPR156Q8NFN8 814 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 KIAA1524Q8TCG1 905 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 NSMCE1Q8WV22 266 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 OR1E3Q8WZA6 343 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 FUBP1Q96AE4 644 aaKnown RBP7.19□□□□□ -1.26
USP46-208ENST00000512656 MED8Q96G25 268 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 PSKH2Q96QS6 385 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 SNRNP25Q9BV90 132 aaKnown RBP7.19□□□□□ -1.26
USP46-208ENST00000512656 MRPL47Q9HD33 250 aaKnown RBP7.19□□□□□ -1.26
USP46-208ENST00000512656 PHPT1Q9NRX4 125 aaPredicted RBP7.19□□□□□ -1.26
USP46-208ENST00000512656 GPATCH2LQ9NWQ4 482 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 SEPT10Q9P0V9 454 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 PCSK1NQ9UHG2 260 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 MOSPD1Q9UJG1 213 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 APPL1Q9UKG1 709 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 FLNCQ14315 2725 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 BOD1L1Q8NFC6 3051 aa7.19□□□□□ -1.26
USP46-208ENST00000512656 A0A1W2PQM1 296 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 TMEM202A6NGA9 273 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 SMTNL1A8MU46 457 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 J3QKU1 62 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 NVLO15381 856 aaKnown RBP7.18□□□□□ -1.26
USP46-208ENST00000512656 TEX33O43247 280 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 NUDT21O43809 227 aaKnown RBP7.18□□□□□ -1.26
USP46-208ENST00000512656 FTLP02792 175 aaPredicted RBP7.18□□□□□ -1.26
USP46-208ENST00000512656 PRKCGP05129 697 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 CYP2A6P11509 494 aaPredicted RBP7.18□□□□□ -1.26
USP46-208ENST00000512656 MYCLP1P12525 358 aaPredicted RBP7.18□□□□□ -1.26
USP46-208ENST00000512656 MIPP30301 263 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 SLC5A2P31639 672 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 SERPINB6P35237 376 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 PCK1P35558 622 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 RGRP47804 291 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms