RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 COL27A1Q8IZC6 1860 aaPredicted RBP10.5□□□□□ -0.73
PDLIM5-217ENST00000512274 NYNRINQ9P2P1 1898 aaKnown RBP10.5□□□□□ -0.73
PDLIM5-217ENST00000512274 TEP1Q99973 2627 aaKnown RBP10.5□□□□□ -0.73
PDLIM5-217ENST00000512274 CACNA1DQ01668 2161 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 FAM237BA0A1B0GVD1 139 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 LRRC72A6NJI9 287 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 CDRT15L2A8MXV6 281 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 MID1O15344 667 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 RNASEH2AO75792 299 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 TNFSF15O95150 251 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 LUC7L3O95232 432 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 SFTPCP11686 197 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 PGAM1P18669 254 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 NFKB1P19838 968 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 ELK3P41970 407 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 VASPP50552 380 aaPredicted RBP10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 GEMIN4P57678 1058 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 FOXK1P85037 733 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 CDH17Q12864 832 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 FASTKD3Q14CZ7 662 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 TBR1Q16650 682 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 POM121L1PQ3SYA9 428 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 BBS9Q3SYG4 887 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 MPPE1Q53F39 396 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 RFWD3Q6PCD5 774 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 ADGRD1Q6QNK2 874 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 RANBP10Q6VN20 620 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 ARHGAP36Q6ZRI8 547 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 USP30Q70CQ3 517 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 TFAP2DQ7Z6R9 452 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 CIR1Q86X95 450 aaPredicted RBP10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 AGGF1Q8N302 714 aaeCLIP10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 BBS5Q8N3I7 341 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 DCAF4L2Q8NA75 395 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 OR4C6Q8NH72 309 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 FAM76AQ8TAV0 307 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 MAPK15Q8TD08 544 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 ARRDC3Q96B67 414 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 APOLD1Q96LR9 279 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 OMDQ99983 421 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 SEMA3CQ99985 751 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 C19orf43Q9BQ61 176 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 SLC25A18Q9H1K4 315 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 CNOT10Q9H9A5 744 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 SP110Q9HB58 689 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 PLAC1Q9HBJ0 212 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 SSU72Q9NP77 194 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 RBM22Q9NW64 420 aaKnown RBP eCLIP10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 BFARQ9NZS9 450 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 VPS18Q9P253 973 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 ZC3H7BQ9UGR2 993 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 SUN2Q9UH99 717 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 RIMKLBQ9ULI2 386 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 ATXN7L1Q9ULK2 861 aaPredicted RBP10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 CA5BQ9Y2D0 317 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 ENTPD2Q9Y5L3 495 aa10.49□□□□□ -0.73
PDLIM5-217ENST00000512274 TEX15Q9BXT5 2789 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 UBR5O95071 2799 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 TCRBV9S1A1TA0A576 114 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 FAM159BA6NKW6 160 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 GOLGA8MH3BSY2 632 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 RGS16O15492 202 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 ZMPSTE24O75844 475 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 USP1O94782 785 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 HLA-DQB2P05538 268 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 THEGLP0DJG4 465 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 CKMT1AP12532 417 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 DGKAP23743 735 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 MAT2AP31153 395 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 DUSP3P51452 185 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 CCR5P51681 352 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 INHBCP55103 352 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 PPP2CBP62714 309 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 RPS24P62847 133 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 PPP2CAP67775 309 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 CYP4F2P78329 520 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 SLC20A2Q08357 652 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 NSUN2Q08J23 767 aaKnown RBP eCLIP10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 SFSWAPQ12872 951 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 LBRQ14739 615 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 SPANXN3Q5MJ09 141 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 IGF2-ASQ6U949 168 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 CRTC1Q6UUV9 634 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 KDELC1Q6UW63 502 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 C3orf62Q6ZUJ4 267 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 B4GALNT4Q76KP1 1039 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 TAOK1Q7L7X3 1001 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 MMAAQ8IVH4 418 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 PALM2Q8IXS6 379 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 ARL14Q8N4G2 192 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 MFSD2AQ8NA29 543 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 OR2W6PQ8NHA6 318 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 OR14C36Q8NHC7 312 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 FIBINQ8TAL6 211 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 GSDMBQ8TAX9 411 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 ARRDC2Q8TBH0 407 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 IFI44Q8TCB0 444 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 TMA16Q96EY4 203 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 ALG14Q96F25 216 aa10.48□□□□□ -0.73
PDLIM5-217ENST00000512274 LIN37Q96GY3 246 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms