RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 FAM172AQ8WUF8 416 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 CPA5Q8WXQ8 436 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 SNRNP40Q96DI7 357 aaKnown RBP11.46□□□□□ -0.57
RNF4-216ENST00000511859 FCRL4Q96PJ5 515 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 HERPUD2Q9BSE4 406 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 CINPQ9BW66 212 aaPredicted RBP11.46□□□□□ -0.57
RNF4-216ENST00000511859 BRD8Q9H0E9 1235 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 CLSTN2Q9H4D0 955 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 CNOT8Q9UFF9 292 aaKnown RBP11.46□□□□□ -0.57
RNF4-216ENST00000511859 TMEM98Q9Y2Y6 226 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 TACC2O95359 2948 aa11.46□□□□□ -0.58
RNF4-216ENST00000511859 PIKFYVEQ9Y2I7 2098 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 ANKUB1A6NFN9 424 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 ARHGAP42A6NI28 874 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 LILRA5A6NI73 299 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 ARGFXA6NJG6 315 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 MBD3O95983 291 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 PNMA6AP0CW24 399 aaPredicted RBP11.45□□□□□ -0.58
RNF4-216ENST00000511859 PRF1P14222 555 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 LPOP22079 712 aaPredicted RBP11.45□□□□□ -0.58
RNF4-216ENST00000511859 RENBPP51606 427 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 AIF1P55008 147 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 STX17P56962 302 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 SH3BP2P78314 561 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 CPZQ66K79 652 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 SLC6A19Q695T7 634 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 SP5Q6BEB4 398 aaPredicted RBP11.45□□□□□ -0.58
RNF4-216ENST00000511859 ADAMTSL4Q6UY14 1074 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 HSD11B1LQ7Z5J1 315 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 TECPR1Q7Z6L1 1165 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 BPHLQ86WA6 291 aaPredicted RBP11.45□□□□□ -0.58
RNF4-216ENST00000511859 ELOA2Q8IYF1 753 aaPredicted RBP11.45□□□□□ -0.58
RNF4-216ENST00000511859 RBMXL3Q8N7X1 1067 aaKnown RBP11.45□□□□□ -0.58
RNF4-216ENST00000511859 C19orf60Q96EN9 201 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 TBC1D10AQ9BXI6 508 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 MFRPQ9BY79 579 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 NUP62CLQ9H1M0 184 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 UCK1Q9HA47 277 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 TMEM63CQ9P1W3 806 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 CPNE7Q9UBL6 633 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 TBC1D29Q9UFV1 150 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 ZNHIT2Q9UHR6 403 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 MAN1B1Q9UKM7 699 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 CTNND2Q9UQB3 1225 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 NF1P21359 2839 aa11.45□□□□□ -0.58
RNF4-216ENST00000511859 SSU72P8A0A1W2PR75 194 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 HEATR9A2RTY3 570 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 BIN1O00499 593 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 HTRA2O43464 458 aaPredicted RBP11.44□□□□□ -0.58
RNF4-216ENST00000511859 SOCS5O75159 536 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 F3P13726 295 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 HTR7P34969 479 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 SEPHS1P49903 392 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 PAPOLAP51003 745 aaKnown RBP11.44□□□□□ -0.58
RNF4-216ENST00000511859 GFERP55789 205 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 NOMO3P69849 1222 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 CHAF1BQ13112 559 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 PAK1Q13153 545 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 TAF3Q5VWG9 929 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 CAVIN1Q6NZI2 390 aaKnown RBP11.44□□□□□ -0.58
RNF4-216ENST00000511859 MARK2Q7KZI7 788 aaKnown RBP11.44□□□□□ -0.58
RNF4-216ENST00000511859 CREBRFQ8IUR6 639 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 IQCKQ8N0W5 287 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 SCRN2Q96FV2 425 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 ELMO2Q96JJ3 720 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 PSKH2Q96QS6 385 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 SLC39A8Q9C0K1 460 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 PDE7BQ9NP56 450 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 SIX2Q9NPC8 291 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 LUZP4Q9P127 313 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 AJAP1Q9UKB5 411 aaPredicted RBP11.44□□□□□ -0.58
RNF4-216ENST00000511859 FARSAQ9Y285 508 aaKnown RBP11.44□□□□□ -0.58
RNF4-216ENST00000511859 FER1L5A0AVI2 2057 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 MYO7BQ6PIF6 2116 aa11.44□□□□□ -0.58
RNF4-216ENST00000511859 ARHGAP10A1A4S6 786 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 KRT86O43790 486 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 ASMTLO95671 621 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 SOD1P00441 154 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 SPTBP11277 2137 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 KRT3P12035 628 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 AMD1P17707 334 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 MMP8P22894 467 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 ITGA1P56199 1179 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 PER3P56645 1201 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 NAA35Q5VZE5 725 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 SCYL2Q6P3W7 929 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 CHST15Q7LFX5 561 aaPredicted RBP11.43□□□□□ -0.58
RNF4-216ENST00000511859 MCEMP1Q8IX19 187 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 FDCSPQ8NFU4 85 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 EXD1Q8NHP7 514 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 JOSD2Q8TAC2 188 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 KLHL6Q8WZ60 621 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 AP2M1Q96CW1 435 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 RNF31Q96EP0 1072 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 NSMCE3Q96MG7 304 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 TGM7Q96PF1 710 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 SMAD5Q99717 465 aaKnown RBP11.43□□□□□ -0.58
RNF4-216ENST00000511859 UNKQ9C0B0 810 aaKnown RBP11.43□□□□□ -0.58
RNF4-216ENST00000511859 RMI1Q9H9A7 625 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 ASF1BQ9NVP2 202 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms