RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 MYO16Q9Y6X6 1858 aa9.4□□□□□ -0.9
SUB1-209ENST00000511615 NYNRINQ9P2P1 1898 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 A0A0D9SEW6 157 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 TYW5A2RUC4 315 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 CCDC85CA6NKD9 419 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 SUPT3HB4E1H0 165 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 STX16-NPEPL1H3BU86 382 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 STX16O14662 325 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 NRP2O60462 931 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 SUPT3HO75486 399 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 LATS1O95835 1130 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 CHEK2O96017 543 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 URODP06132 367 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 LBPP18428 481 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 ATF6P18850 670 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 FMO4P31512 558 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 SLC6A4P31645 630 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 BMP8BP34820 402 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 TTPAP49638 278 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 LRP8Q14114 963 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 TRIM25Q14258 630 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 VEPH1Q14D04 833 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 RPS6KA2Q15349 733 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 CYTH1Q15438 398 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 LRRC36Q1X8D7 754 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 KIF19Q2TAC6 998 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 SPATS1Q496A3 300 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 PABPC1LQ4VXU2 614 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 C9orf50Q5SZB4 431 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 KANK2Q63ZY3 851 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 OR52E8Q6IFG1 317 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 RNF111Q6ZNA4 994 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 SPATA19Q7Z5L4 167 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 PIM3Q86V86 326 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 DENND1CQ8IV53 801 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 HOMEZQ8IX15 550 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 MIER2Q8N344 545 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 LPGAT1Q92604 370 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 EXT2Q93063 718 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.39□□□□□ -0.91
SUB1-209ENST00000511615 PBXIP1Q96AQ6 731 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 PTERQ96BW5 349 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 CYP2S1Q96SQ9 504 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 HOPXQ9BPY8 73 aaPredicted RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 NUSAP1Q9BXS6 441 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 TDRD1Q9BXT4 1180 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 MID1IP1Q9NPA3 183 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 GID8Q9NWU2 228 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 CACNA2D2Q9NY47 1150 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 TRMT6Q9UJA5 497 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 CNOT11Q9UKZ1 510 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 TBC1D30Q9Y2I9 924 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 PCDHGA7Q9Y5G6 932 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 H3BNC9 293 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 UBXN8O00124 270 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 TXNDC9O14530 226 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 UBFD1O14562 309 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 ACOT8O14734 319 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 GIPC1O14908 333 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 STX7O15400 261 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 TEX28O15482 410 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 DENRO43583 198 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 MLYCDO95822 493 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 PIM1P11309 404 aaPredicted RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 PKMP14618 531 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 CR2P20023 1033 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 CORO1AP31146 461 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 CLCN4P51793 760 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 AQP4P55087 323 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 ERVK-21P61565 698 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 MRPS22P82650 360 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 GRIK2Q13002 908 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 LCP2Q13094 533 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 SEMA3AQ14563 771 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 PFKFB4Q16877 469 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 ADGRF1Q5T601 910 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 IRAK1BP1Q5VVH5 260 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 RNF219Q5W0B1 726 aaPredicted RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 PDE12Q6L8Q7 609 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 STK40Q8N2I9 435 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 PCDH20Q8N6Y1 951 aaKnown RBP9.39□□□□□ -0.91
SUB1-209ENST00000511615 LPCAT1Q8NF37 534 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 OR4K2Q8NGD2 314 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 TSPEARQ8WU66 669 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 TWIST2Q8WVJ9 160 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 MYEOVQ96EZ4 313 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 DCUN1D1Q96GG9 259 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 ATOH8Q96SQ7 321 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 TSC22D3Q99576 134 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 CCT7Q99832 543 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 YIPF3Q9GZM5 350 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 MUC3BQ9H195 1237 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 CCDC167Q9P0B6 97 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 NDUFA13Q9P0J0 144 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 SPO11Q9Y5K1 396 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 RAI2Q9Y5P3 530 aa9.39□□□□□ -0.91
SUB1-209ENST00000511615 CHD9Q3L8U1 2897 aa9.38□□□□□ -0.91
SUB1-209ENST00000511615 PRSS51A0A1B0GVH4 220 aa9.38□□□□□ -0.91
SUB1-209ENST00000511615 H0YJX3 145 aa9.38□□□□□ -0.91
SUB1-209ENST00000511615 CBX4O00257 560 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms