RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 PHYKPLQ8IUZ5 450 aa17.13■□□□□ 0.33
CLDND1-221ENST00000510541 HID1Q8IV36 788 aa17.13■□□□□ 0.33
CLDND1-221ENST00000510541 PDCD7Q8N8D1 485 aaKnown RBP17.13■□□□□ 0.33
CLDND1-221ENST00000510541 WDR48Q8TAF3 677 aa17.13■□□□□ 0.33
CLDND1-221ENST00000510541 NAT6Q93015 286 aa17.13■□□□□ 0.33
CLDND1-221ENST00000510541 TSACCQ96A04 125 aaPredicted RBP17.13■□□□□ 0.33
CLDND1-221ENST00000510541 PDXPQ96GD0 296 aa17.13■□□□□ 0.33
CLDND1-221ENST00000510541 GSDMCQ9BYG8 508 aa17.13■□□□□ 0.33
CLDND1-221ENST00000510541 ETNK1Q9HBU6 452 aa17.13■□□□□ 0.33
CLDND1-221ENST00000510541 DNMT3AQ9Y6K1 912 aaPredicted RBP17.13■□□□□ 0.33
CLDND1-221ENST00000510541 KNTC1P50748 2209 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 LY6G6EA0A0G2JKS1 128 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 GOLGA6L10A0A0M3HER8 536 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 A0A0U1RQS6 177 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 USP27XA6NNY8 438 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 LDB2O43679 373 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 NUAK1O60285 661 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 SDC3O75056 442 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 DNAJC6O75061 913 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 FUCA1P04066 466 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 RPL22P35268 128 aaKnown RBP17.12■□□□□ 0.33
CLDND1-221ENST00000510541 ZNF140P52738 457 aaPredicted RBP17.12■□□□□ 0.33
CLDND1-221ENST00000510541 SMAD1Q15797 465 aaKnown RBP17.12■□□□□ 0.33
CLDND1-221ENST00000510541 GPR33Q49SQ1 333 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 ZNF542PQ5EBM4 170 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 KDM7AQ6ZMT4 941 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 NLRP9Q7RTR0 991 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 RBFAQ8N0V3 343 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 GALNT15Q8N3T1 639 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 SLC25A41Q8N5S1 370 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 DDHD1Q8NEL9 900 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 GPR156Q8NFN8 814 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 BLOC1S5Q8TDH9 187 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 LMX1AQ8TE12 382 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 COG1Q8WTW3 980 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 STYXQ8WUJ0 223 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 HEXDCQ8WVB3 486 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 GRAMD1AQ96CP6 724 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 APOLD1Q96LR9 279 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 RUNDC3BQ96NL0 473 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 AGAP2Q99490 1192 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 SPATA16Q9BXB7 569 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 TCEAL2Q9H3H9 227 aaPredicted RBP17.12■□□□□ 0.33
CLDND1-221ENST00000510541 CASS4Q9NQ75 786 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 CD84Q9UIB8 345 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 SUFUQ9UMX1 484 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 NEU2Q9Y3R4 380 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 NEUROG3Q9Y4Z2 214 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 U3KQA8 63 aa17.12■□□□□ 0.33
CLDND1-221ENST00000510541 SPAARA0A1B0GVQ0 90 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 GAPDHSO14556 408 aaPredicted RBP17.11■□□□□ 0.33
CLDND1-221ENST00000510541 STX7O15400 261 aaKnown RBP17.11■□□□□ 0.33
CLDND1-221ENST00000510541 RFPL3O75679 317 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 GAS8O95995 478 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 IFNB1P01574 187 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 PIRTP0C851 137 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 TPSB2P20231 275 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 GNG11P61952 73 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 ILF3Q12906 894 aaKnown RBP eCLIP17.11■□□□□ 0.33
CLDND1-221ENST00000510541 TPSAB1Q15661 275 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 LDLRAP1Q5SW96 308 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 TMPRSS7Q7RTY8 843 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 SLCO6A1Q86UG4 719 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 TMPRSS12Q86WS5 348 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 ARL10Q8N8L6 244 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 GRK7Q8WTQ7 553 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 PTCD2Q8WV60 388 aaKnown RBP17.11■□□□□ 0.33
CLDND1-221ENST00000510541 ZNF514Q96K75 400 aaPredicted RBP17.11■□□□□ 0.33
CLDND1-221ENST00000510541 NAPGQ99747 312 aaPredicted RBP17.11■□□□□ 0.33
CLDND1-221ENST00000510541 ZCCHC2Q9C0B9 1178 aaKnown RBP17.11■□□□□ 0.33
CLDND1-221ENST00000510541 CYP4F12Q9HCS2 524 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 RAB6BQ9NRW1 208 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 PCYOX1Q9UHG3 505 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 GPR34Q9UPC5 381 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 SAR1BQ9Y6B6 198 aa17.11■□□□□ 0.33
CLDND1-221ENST00000510541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.11■□□□□ 0.33
CLDND1-221ENST00000510541 GLYATL1P3A0A0U1RQE8 302 aa17.1■□□□□ 0.33
CLDND1-221ENST00000510541 MED19A0JLT2 244 aaPredicted RBP17.1■□□□□ 0.33
CLDND1-221ENST00000510541 CTAGE9A4FU28 777 aa17.1■□□□□ 0.33
CLDND1-221ENST00000510541 PRR19A6NJB7 356 aa17.1■□□□□ 0.33
CLDND1-221ENST00000510541 PHF2O75151 1096 aa17.1■□□□□ 0.33
CLDND1-221ENST00000510541 SLC25A14O95258 325 aaPredicted RBP17.1■□□□□ 0.33
CLDND1-221ENST00000510541 COILP38432 576 aaPredicted RBP17.1■□□□□ 0.33
CLDND1-221ENST00000510541 ADCY8P40145 1251 aa17.1■□□□□ 0.33
CLDND1-221ENST00000510541 XIAPP98170 497 aa17.1■□□□□ 0.33
CLDND1-221ENST00000510541 ACVR1Q04771 509 aa17.1■□□□□ 0.33
CLDND1-221ENST00000510541 SNX1Q13596 522 aa17.1■□□□□ 0.33
CLDND1-221ENST00000510541 MAGOHBQ96A72 148 aaKnown RBP17.1■□□□□ 0.33
CLDND1-221ENST00000510541 OR2M4Q96R27 311 aa17.1■□□□□ 0.33
CLDND1-221ENST00000510541 TMEM168Q9H0V1 697 aa17.1■□□□□ 0.33
CLDND1-221ENST00000510541 CARS2Q9HA77 564 aaKnown RBP17.1■□□□□ 0.33
CLDND1-221ENST00000510541 NLE1Q9NVX2 485 aaPredicted RBP17.1■□□□□ 0.33
CLDND1-221ENST00000510541 ARL5AQ9Y689 179 aa17.1■□□□□ 0.33
CLDND1-221ENST00000510541 BPTFQ12830 3046 aa17.1■□□□□ 0.33
CLDND1-221ENST00000510541 TRBV5-4A0A0C4DH59 114 aa17.09■□□□□ 0.33
CLDND1-221ENST00000510541 HEATR9A2RTY3 570 aa17.09■□□□□ 0.33
CLDND1-221ENST00000510541 TUBB4AP04350 444 aa17.09■□□□□ 0.33
CLDND1-221ENST00000510541 NFATC2Q13469 925 aa17.09■□□□□ 0.33
CLDND1-221ENST00000510541 NR1D2Q14995 579 aa17.09■□□□□ 0.33
CLDND1-221ENST00000510541 NR0B2Q15466 257 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms