RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 USP41Q3LFD5 358 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 VPS26BQ4G0F5 336 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 PPM1JQ5JR12 505 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 PLET1Q6UQ28 207 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 CHSY3Q70JA7 882 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 HTRA1Q92743 480 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 FAM210AQ96ND0 272 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 FERD3LQ96RJ6 166 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 INTS7Q9NVH2 962 aaKnown RBP10.55□□□□□ -0.72
NEK1-206ENST00000510533 AKAP7Q9P0M2 348 aaPredicted RBP10.55□□□□□ -0.72
NEK1-206ENST00000510533 WTIPA6NIX2 430 aaPredicted RBP10.55□□□□□ -0.72
NEK1-206ENST00000510533 ARHGEF33A8MVX0 844 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 STX16-NPEPL1H3BU86 382 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 STX16O14662 325 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 CILPO75339 1184 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 IL1BP01584 269 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 SP100P23497 879 aaPredicted RBP10.55□□□□□ -0.72
NEK1-206ENST00000510533 ARL13AQ5H913 290 aaPredicted RBP10.55□□□□□ -0.72
NEK1-206ENST00000510533 PIK3R6Q5UE93 754 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 REP15Q6BDI9 236 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 RHBDF2Q6PJF5 856 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 DEFB132Q7Z7B7 95 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 C12orf50Q8NA57 414 aaPredicted RBP10.55□□□□□ -0.72
NEK1-206ENST00000510533 PDPRQ8NCN5 879 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 ZNF248Q8NDW4 579 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 FTHL17Q9BXU8 183 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 IKZF4Q9H2S9 585 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 CHRAC1Q9NRG0 131 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 RWDD3Q9Y3V2 267 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 ELOVL7A1L3X0 281 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 C5orf60A6NFR6 353 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 TP73O15350 636 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 FABP3P05413 133 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 AQP1P29972 269 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 RPS9P46781 194 aaKnown RBP10.55□□□□□ -0.72
NEK1-206ENST00000510533 LIMK2P53671 638 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 LIPEQ05469 1076 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 FUT2Q10981 343 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 FASTKD3Q14CZ7 662 aaKnown RBP10.55□□□□□ -0.72
NEK1-206ENST00000510533 VWA5B1Q5TIE3 1220 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 CAPN13Q6MZZ7 669 aaPredicted RBP10.55□□□□□ -0.72
NEK1-206ENST00000510533 ARL10Q8N8L6 244 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 LRRC57Q8N9N7 239 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 SLC4A11Q8NBS3 891 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 NAT14Q8WUY8 206 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 TIFAQ96CG3 184 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 UNC93B1Q9H1C4 597 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 GBA3Q9H227 469 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 SLC35C2Q9NQQ7 365 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 SEMA3GQ9NS98 782 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 KCTD5Q9NXV2 234 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 GCATO75600 419 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 ITPKAP23677 461 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 ITGA7Q13683 1181 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 RFTN2Q52LD8 501 aaPredicted RBP10.55□□□□□ -0.72
NEK1-206ENST00000510533 PRAMEF19Q5SWL8 479 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 GPR158Q5T848 1215 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 CWF19L1Q69YN2 538 aaKnown RBP10.55□□□□□ -0.72
NEK1-206ENST00000510533 BTN2A1Q7KYR7 527 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 OR4K2Q8NGD2 314 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 TTLL2Q9BWV7 592 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 C12orf65Q9H3J6 166 aaKnown RBP10.55□□□□□ -0.72
NEK1-206ENST00000510533 EXD2Q9NVH0 621 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 DGKBQ9Y6T7 804 aa10.55□□□□□ -0.72
NEK1-206ENST00000510533 IQCMA0A1B0GVH7 501 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 FAM86C2PA6NEL3 165 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 SLC15A5A6NIM6 579 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 OR6C75A6NL08 312 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 AP2A1O95782 977 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 C4BPAP04003 597 aaKnown RBP10.54□□□□□ -0.72
NEK1-206ENST00000510533 FAUP35544 74 aaKnown RBP10.54□□□□□ -0.72
NEK1-206ENST00000510533 GMFBP60983 142 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 GRM3Q14832 879 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 PARP15Q460N3 678 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 ZDHHC20Q5W0Z9 365 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 RNF19BQ6ZMZ0 732 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 OAFQ86UD1 273 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 RAVER1Q8IY67 606 aaKnown RBP10.54□□□□□ -0.72
NEK1-206ENST00000510533 VANGL1Q8TAA9 524 aaPredicted RBP10.54□□□□□ -0.72
NEK1-206ENST00000510533 TLCD1Q96CP7 247 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 MCMBPQ9BTE3 642 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 SDCBP2Q9H190 292 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 ACSS2Q9NR19 701 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 DNAJC11Q9NVH1 559 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 PPIEQ9UNP9 301 aaKnown RBP10.54□□□□□ -0.72
NEK1-206ENST00000510533 CNTNAP1P78357 1384 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 FAM240BA0A1B0GVZ2 78 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 CCNKO75909 580 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 C9P02748 559 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 CD52P31358 61 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 JAM2P57087 298 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 OLFML2AQ68BL7 652 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 TMPRSS11AQ6ZMR5 421 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 FAM92BQ6ZTR7 304 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 TDRPQ86YL5 185 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 CERS5Q8N5B7 392 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 MEIOBQ8N635 442 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 PIK3C3Q8NEB9 887 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 BTN2A3PQ96KV6 586 aa10.54□□□□□ -0.72
NEK1-206ENST00000510533 TIMM22Q9Y584 194 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms