RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 FRMD8Q9BZ67 464 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 POLR1EQ9GZS1 481 aaKnown RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 C6orf62Q9GZU0 229 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ANKRD2Q9GZV1 360 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 BTBD1Q9H0C5 482 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 USP44Q9H0E7 712 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 CUEDC2Q9H467 287 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 PCDH9Q9HC56 1237 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 IL1RAPL2Q9NP60 686 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ARHGEF4Q9NR80 690 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ZDHHC18Q9NUE0 388 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 SPTLC3Q9NUV7 552 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 EURLQ9NYK6 297 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 DNAJB4Q9UDY4 337 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 KCNN3Q9UGI6 736 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ZNF580Q9UK33 172 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 TMPRSS11EQ9UL52 423 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ERVK-11Q9UQG0 969 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 DNAJC16Q9Y2G8 782 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 SAMHD1Q9Y3Z3 626 aaKnown RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 PCDHA3Q9Y5H8 950 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ARAP3Q8WWN8 1544 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 TET3O43151 1660 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 PIK3C2GO75747 1445 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 USP32Q8NFA0 1604 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ABCC1P33527 1531 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 ASXL1Q8IXJ9 1541 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 A0A1W2PRX2 142 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 LGALS16A8MUM7 142 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 ERVV-1B6SEH8 477 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 H0Y8G0 127 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 H3BML4 177 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 GPR171O14626 319 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 MED7O43513 233 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 VEGFDO43915 354 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 SUSD5O60279 629 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 RASAL1O95294 804 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 BMP10O95393 424 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 DIRAS3O95661 229 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 CRYZL1O95825 349 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 FTCDO95954 541 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 ASS1P00966 412 aaKnown RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 THP07101 528 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 GSTA2P09210 222 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 CSF1P09603 554 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 HNRNPA1P09651 372 aaKnown RBP eCLIP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 SUPT20HL2P0C7V6 817 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 JMJD7P0C870 316 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 ARP10275 920 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 UMPSP11172 480 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 CYP2B6P20813 491 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 CYP3A5P20815 502 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 SYT1P21579 422 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 AHCYP23526 432 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 CCNE1P24864 410 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 TNFRSF8P28908 595 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 SLC5A2P31639 672 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 MDH1P40925 334 aaKnown RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 EIF2DP41214 584 aaKnown RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 CDKN1BP46527 198 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 AVPR1BP47901 424 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 KCNJ5P48544 419 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 SLC11A1P49279 550 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 ALDH7A1P49419 539 aaKnown RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 MEOX1P50221 254 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 CLCN5P51795 746 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 SLC7A2P52569 658 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 SUCLG1P53597 346 aaKnown RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 RABGGTBP53611 331 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 UBE2HP62256 183 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 CREMQ03060 361 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 ZNF543Q08ER8 600 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 LCP2Q13094 533 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 PMS2P3Q13401 168 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 DYRK1AQ13627 763 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 CAPSQ13938 189 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 ARHGAP44Q17R89 818 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 TIGD6Q17RP2 521 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 SMTNL2Q2TAL5 461 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 DNAL1Q4LDG9 190 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 GPAT3Q53EU6 434 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 ERMARDQ5T6L9 678 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 PRAMEF20Q5VT98 475 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 NAA35Q5VZE5 725 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 KIAA1841Q6NSI8 718 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 SCYL2Q6P3W7 929 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 FBXO38Q6PIJ6 1188 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 USP17L6PQ6QN14 398 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 MSANTD1Q6ZTZ1 278 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 HTR3DQ70Z44 454 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 FGD2Q7Z6J4 655 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 VASH2Q86V25 355 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 PALB2Q86YC2 1186 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 DENND1CQ8IV53 801 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 HERC6Q8IVU3 1022 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 SCN4BQ8IWT1 228 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 MB21D2Q8IYB1 491 aaPredicted RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 DIS3L2Q8IYB7 885 aaKnown RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 GRAMD1CQ8IYS0 662 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 TAGAPQ8N103 731 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms