RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 FNBP1Q96RU3 617 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 PIP5K1AQ99755 562 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 FRMD8Q9BZ67 464 aaPredicted RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 ABCG4Q9H172 646 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 RANBP17Q9H2T7 1088 aaKnown RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 STN1Q9H668 368 aaKnown RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 TLR8Q9NR97 1041 aaKnown RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 HCFC1R1Q9NWW0 138 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 WDR35Q9P2L0 1181 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 MORF4L1Q9UBU8 362 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 CNOT7Q9UIV1 285 aaKnown RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 SARDHQ9UL12 918 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 CORO1CQ9ULV4 474 aaPredicted RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 CGNL1Q0VF96 1302 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.08□□□□□ -2.08
XRCC4-204ENST00000509268 MBD3L5A6NJ08 208 aaPredicted RBP2.08□□□□□ -2.08
XRCC4-204ENST00000509268 LIPT2A6NK58 231 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 FAM90A7PA6NKC0 464 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 FAM90A22PA8MWA6 464 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 EFCAB8A8MWE9 144 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 FAM90A12PA8MX19 464 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 A8MXE2 369 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 FAM90A23PA8MXZ1 464 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 CHL1O00533 1208 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 RNMTO43148 476 aaKnown RBP2.08□□□□□ -2.08
XRCC4-204ENST00000509268 HLA-DQA2P01906 255 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 QDPRP09417 244 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 RARGP13631 454 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 IFNAR1P17181 557 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 ATP5DP30049 168 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 GCH1P30793 250 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 TLX1P31314 330 aaPredicted RBP2.08□□□□□ -2.08
XRCC4-204ENST00000509268 GRK5P34947 590 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 BSGP35613 385 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 ATP6V1E1P36543 226 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 RPL3P39023 403 aaKnown RBP2.08□□□□□ -2.08
XRCC4-204ENST00000509268 PBX3P40426 434 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 HNF4AP41235 474 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 CD86P42081 329 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 MSH2P43246 934 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 ZNF41P51814 821 aaPredicted RBP2.08□□□□□ -2.08
XRCC4-204ENST00000509268 ZNF131P52739 623 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 RARSP54136 660 aaKnown RBP2.08□□□□□ -2.08
XRCC4-204ENST00000509268 FAM3BP58499 235 aaPredicted RBP2.08□□□□□ -2.08
XRCC4-204ENST00000509268 UBXN1Q04323 297 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 C17orf67Q0P5P2 114 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 AIMP1Q12904 312 aaKnown RBP2.08□□□□□ -2.08
XRCC4-204ENST00000509268 BFSP1Q12934 665 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 SMC1AQ14683 1233 aaKnown RBP2.08□□□□□ -2.08
XRCC4-204ENST00000509268 CBWD5Q5RIA9 395 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 GARNL3Q5VVW2 1013 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 NCAPH2Q6IBW4 605 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 CYP20A1Q6UW02 462 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 CATSPER4Q7RTX7 472 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 PLPPR4Q7Z2D5 763 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 ADGRA1Q86SQ6 560 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 TRABD2AQ86V40 505 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 BRSK2Q8IWQ3 736 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 ARL6IP6Q8N6S5 226 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 TEX9Q8N6V9 391 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 FRMD1Q8N878 549 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 AMER3Q8N944 861 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 KCNH5Q8NCM2 988 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 SCFD2Q8WU76 684 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 WDR60Q8WVS4 1066 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 FIG4Q92562 907 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 PGAP3Q96FM1 320 aaPredicted RBP2.08□□□□□ -2.08
XRCC4-204ENST00000509268 ABHD1Q96SE0 405 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 PI4K2AQ9BTU6 479 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 TRIM15Q9C019 465 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 INTS2Q9H0H0 1204 aaKnown RBP2.08□□□□□ -2.08
XRCC4-204ENST00000509268 TAOK3Q9H2K8 898 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 RABEP2Q9H5N1 569 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 CXorf56Q9H5V9 222 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 ERVMER34-1Q9H9K5 563 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 PRR34Q9NV39 138 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 TRMT1Q9NXH9 659 aaKnown RBP2.08□□□□□ -2.08
XRCC4-204ENST00000509268 SLCO3A1Q9UIG8 710 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 GTF3C4Q9UKN8 822 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 ODF2LQ9ULJ1 636 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 TP53TG3Q9ULZ0 132 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 KNSTRNQ9Y448 316 aa2.08□□□□□ -2.08
XRCC4-204ENST00000509268 COL4A4P53420 1690 aaPredicted RBP2.08□□□□□ -2.08
XRCC4-204ENST00000509268 A0A1W2PQM1 296 aa2.07□□□□□ -2.08
XRCC4-204ENST00000509268 A8MV72 311 aaPredicted RBP2.07□□□□□ -2.08
XRCC4-204ENST00000509268 M0QYT0 321 aa2.07□□□□□ -2.08
XRCC4-204ENST00000509268 TSPAN4O14817 238 aa2.07□□□□□ -2.08
XRCC4-204ENST00000509268 SYN3O14994 580 aa2.07□□□□□ -2.08
XRCC4-204ENST00000509268 LDLRAD4O15165 306 aa2.07□□□□□ -2.08
XRCC4-204ENST00000509268 GUCY1B2O75343 617 aa2.07□□□□□ -2.08
XRCC4-204ENST00000509268 CSPG5O95196 566 aa2.07□□□□□ -2.08
XRCC4-204ENST00000509268 CCNDBP1O95273 360 aa2.07□□□□□ -2.08
XRCC4-204ENST00000509268 OR2C1O95371 312 aa2.07□□□□□ -2.08
XRCC4-204ENST00000509268 C22orf31O95567 290 aa2.07□□□□□ -2.08
XRCC4-204ENST00000509268 METTL18O95568 372 aa2.07□□□□□ -2.08
XRCC4-204ENST00000509268 SLC4A1P02730 911 aa2.07□□□□□ -2.08
XRCC4-204ENST00000509268 ATP5BP06576 529 aaKnown RBP2.07□□□□□ -2.08
XRCC4-204ENST00000509268 CYP3A4P08684 503 aa2.07□□□□□ -2.08
XRCC4-204ENST00000509268 ACP5P13686 325 aa2.07□□□□□ -2.08
XRCC4-204ENST00000509268 NR1D1P20393 614 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms