RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 SLC17A4Q9Y2C5 497 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 ARL5AQ9Y689 179 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 SLC30A1Q9Y6M5 507 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 DNAH14Q0VDD8 3507 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 TMEM131Q92545 1883 aa9.08□□□□□ -0.96
NUP54-207ENST00000508583 KLHL33A6NCF5 533 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 CFAP99D6REC4 459 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 LMO7DNF2Z398 122 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 H7C0S8 307 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 K7ESM1 405 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 AURKAO14965 403 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 SCAMP1O15126 338 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 AQP9O43315 295 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 LDB2O43679 373 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 VEGFDO43915 354 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 SRP72O76094 671 aaKnown RBP9.07□□□□□ -0.96
NUP54-207ENST00000508583 URI1O94763 535 aaPredicted RBP9.07□□□□□ -0.96
NUP54-207ENST00000508583 ASMTLO95671 621 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 SOD1P00441 154 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 IVLP07476 585 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 ANXA6P08133 673 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 CDK4P11802 303 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 CD59P13987 128 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 VCLP18206 1134 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 PAMP19021 973 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 DGKAP23743 735 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 RPIAP49247 311 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 ZNF140P52738 457 aaPredicted RBP9.07□□□□□ -0.96
NUP54-207ENST00000508583 IL9RQ01113 521 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 ILF3Q12906 894 aaKnown RBP eCLIP9.07□□□□□ -0.96
NUP54-207ENST00000508583 EIF2B5Q13144 721 aaKnown RBP9.07□□□□□ -0.96
NUP54-207ENST00000508583 POU6F1Q14863 301 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 TRIP13Q15645 432 aaPredicted RBP9.07□□□□□ -0.96
NUP54-207ENST00000508583 ALG11Q2TAA5 492 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 GPR33Q49SQ1 333 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 PRRT3Q5FWE3 981 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 ZCCHC8Q6NZY4 707 aaKnown RBP9.07□□□□□ -0.96
NUP54-207ENST00000508583 LRRC8BQ6P9F7 803 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 FAM151BQ6UXP7 276 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 DBX2Q6ZNG2 339 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 HOOK3Q86VS8 718 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 GALNT13Q8IUC8 556 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 GLIS1Q8NBF1 620 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 GPR26Q8NDV2 337 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 ZNF548Q8NEK5 533 aaPredicted RBP9.07□□□□□ -0.96
NUP54-207ENST00000508583 SPATA4Q8NEY3 305 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 OR4K2Q8NGD2 314 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 OR52K1Q8NGK4 314 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 OR2I1PQ8NGU4 316 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 GABPB2Q8TAK5 448 aaPredicted RBP9.07□□□□□ -0.96
NUP54-207ENST00000508583 GDAP1Q8TB36 358 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 LMX1AQ8TE12 382 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 RHBDD1Q8TEB9 315 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 ZNF592Q92610 1267 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 EID2BQ96D98 161 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 ZNF514Q96K75 400 aaPredicted RBP9.07□□□□□ -0.96
NUP54-207ENST00000508583 SMIM14Q96QK8 99 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 GSDMCQ9BYG8 508 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 CARS2Q9HA77 564 aaKnown RBP9.07□□□□□ -0.96
NUP54-207ENST00000508583 IL21RQ9HBE5 538 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 TRIM39Q9HCM9 518 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 BPIFA1Q9NP55 256 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 IL26Q9NPH9 171 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 NLE1Q9NVX2 485 aaPredicted RBP9.07□□□□□ -0.96
NUP54-207ENST00000508583 TRNAU1APQ9NX07 287 aaKnown RBP9.07□□□□□ -0.96
NUP54-207ENST00000508583 SAMD15Q9P1V8 674 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 FTSJ1Q9UET6 329 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 CDC23Q9UJX2 597 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 NEU2Q9Y3R4 380 aa9.07□□□□□ -0.96
NUP54-207ENST00000508583 SCN8AQ9UQD0 1980 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 A0A0U1RQS6 177 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 MAGEB16A2A368 324 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 FAM187AA6NFU0 413 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 TMEM202A6NGA9 273 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 MROH6A6NGR9 719 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 FADS2P1A8MWK0 482 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 QSOX1O00391 747 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 PFDN6O15212 129 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 INPP4BO15327 924 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 ZW10O43264 779 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 TPH1P17752 444 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 MSH3P20585 1137 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 DUSP3P51452 185 aaPredicted RBP9.06□□□□□ -0.96
NUP54-207ENST00000508583 NOVA1P51513 510 aaKnown RBP9.06□□□□□ -0.96
NUP54-207ENST00000508583 SESN2P58004 480 aaPredicted RBP9.06□□□□□ -0.96
NUP54-207ENST00000508583 PRAMEP78395 509 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 NFATC2Q13469 925 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 KCNJ11Q14654 390 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 MORF4L2Q15014 288 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 DNAJC21Q5F1R6 531 aaKnown RBP9.06□□□□□ -0.96
NUP54-207ENST00000508583 AARS2Q5JTZ9 985 aaKnown RBP9.06□□□□□ -0.96
NUP54-207ENST00000508583 PCID2Q5JVF3 399 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 LYPLAL1Q5VWZ2 237 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 AFTPHQ6ULP2 937 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 RFLNAQ6ZTI6 216 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 ZNF572Q7Z3I7 529 aaPredicted RBP9.06□□□□□ -0.96
NUP54-207ENST00000508583 SNX20Q7Z614 316 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 PIP4P1Q86T03 277 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 PRUNE1Q86TP1 453 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 JAMLQ86YT9 394 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms