RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 ULK4Q96C45 1275 aa8.59□□□□□ -1.03
USP46-207ENST00000508499 AP2M1Q96CW1 435 aa8.59□□□□□ -1.03
USP46-207ENST00000508499 CERS2Q96G23 380 aa8.59□□□□□ -1.03
USP46-207ENST00000508499 COX14Q96I36 57 aa8.59□□□□□ -1.03
USP46-207ENST00000508499 LOXL4Q96JB6 756 aa8.59□□□□□ -1.03
USP46-207ENST00000508499 DNAJC1Q96KC8 554 aaKnown RBP8.59□□□□□ -1.03
USP46-207ENST00000508499 TBATAQ96M53 351 aa8.59□□□□□ -1.03
USP46-207ENST00000508499 FAM167BQ9BTA0 163 aa8.59□□□□□ -1.03
USP46-207ENST00000508499 MCMBPQ9BTE3 642 aa8.59□□□□□ -1.03
USP46-207ENST00000508499 LRFN3Q9BTN0 628 aa8.59□□□□□ -1.03
USP46-207ENST00000508499 WRAP53Q9BUR4 548 aaKnown RBP8.59□□□□□ -1.03
USP46-207ENST00000508499 TEX101Q9BY14 249 aa8.59□□□□□ -1.03
USP46-207ENST00000508499 ABCG8Q9H221 673 aa8.59□□□□□ -1.03
USP46-207ENST00000508499 C6orf106Q9H6K1 298 aaPredicted RBP8.59□□□□□ -1.03
USP46-207ENST00000508499 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.59□□□□□ -1.03
USP46-207ENST00000508499 CHMP2BQ9UQN3 213 aa8.59□□□□□ -1.03
USP46-207ENST00000508499 MAD1L1Q9Y6D9 718 aa8.59□□□□□ -1.03
USP46-207ENST00000508499 V9GYY5 206 aaPredicted RBP8.59□□□□□ -1.03
USP46-207ENST00000508499 FAM159BA6NKW6 160 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 RIPK2O43353 540 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 BANF1O75531 89 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 TCEA3O75764 348 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 PRAMEF1O95521 474 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 PAK4O96013 591 aaPredicted RBP8.58□□□□□ -1.04
USP46-207ENST00000508499 H2AFXP16104 143 aaPredicted RBP8.58□□□□□ -1.04
USP46-207ENST00000508499 ITGALP20701 1170 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 CD9P21926 228 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 AKT2P31751 481 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 TTPAP49638 278 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 PMS2P54278 862 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 RACK1P63244 317 aaKnown RBP8.58□□□□□ -1.04
USP46-207ENST00000508499 PRAMEP78395 509 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 RPL6Q02878 288 aaKnown RBP8.58□□□□□ -1.04
USP46-207ENST00000508499 MGAT5Q09328 741 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 SEPT6Q14141 434 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 ITIH4Q14624 930 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 NAA30Q147X3 362 aaPredicted RBP8.58□□□□□ -1.04
USP46-207ENST00000508499 PLK5Q496M5 336 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 WDR45BQ5MNZ6 344 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 RNF187Q5TA31 235 aaPredicted RBP8.58□□□□□ -1.04
USP46-207ENST00000508499 MRNIPQ6NTE8 343 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 TSSK4Q6SA08 328 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 FAM124AQ86V42 546 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 KCNMB4Q86W47 210 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 CILP2Q8IUL8 1156 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 SLC41A1Q8IVJ1 513 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 FAM160A2Q8N612 972 aaPredicted RBP8.58□□□□□ -1.04
USP46-207ENST00000508499 ZNF398Q8TD17 642 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 BTN2A2Q8WVV5 523 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 RLN3Q8WXF3 142 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 HDAC10Q969S8 669 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 ZNF669Q96BR6 464 aaPredicted RBP8.58□□□□□ -1.04
USP46-207ENST00000508499 ZNF775Q96BV0 537 aaPredicted RBP8.58□□□□□ -1.04
USP46-207ENST00000508499 ERLEC1Q96DZ1 483 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 EPB41L4BQ9H329 900 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 SEMA4AQ9H3S1 761 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 ACSS3Q9H6R3 686 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 EBF2Q9HAK2 575 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 INTS10Q9NVR2 710 aaKnown RBP8.58□□□□□ -1.04
USP46-207ENST00000508499 NINJ2Q9NZG7 142 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 VPS18Q9P253 973 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 SLC2A6Q9UGQ3 507 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 CORO1CQ9ULV4 474 aaPredicted RBP8.58□□□□□ -1.04
USP46-207ENST00000508499 KCTD3Q9Y597 815 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 SLC30A1Q9Y6M5 507 aa8.58□□□□□ -1.04
USP46-207ENST00000508499 CACNA1EQ15878 2313 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 PCDH15Q96QU1 1955 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 A0A087WUV0 522 aaPredicted RBP8.57□□□□□ -1.04
USP46-207ENST00000508499 A0A0U1RQS6 177 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 CCDC162PA2VCL2 907 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 KLHL33A6NCF5 533 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 FAM86C2PA6NEL3 165 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 FADS2P1A8MWK0 482 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 A8MX80 341 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 PRR5-ARHGAP8B1AHC4 643 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 QSOX1O00391 747 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 FPGTO14772 594 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 TNFRSF10CO14798 259 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 PFDN6O15212 129 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 CD3EAPO15446 510 aaKnown RBP8.57□□□□□ -1.04
USP46-207ENST00000508499 MAGEC1O60732 1142 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 RHOBTB1O94844 696 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 VAPBO95292 243 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 GOT2P00505 430 aaKnown RBP8.57□□□□□ -1.04
USP46-207ENST00000508499 GSTM1P09488 218 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 MYCLP1P12525 358 aaPredicted RBP8.57□□□□□ -1.04
USP46-207ENST00000508499 BCKDHBP21953 392 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 RPS3P23396 243 aaKnown RBP eCLIP8.57□□□□□ -1.04
USP46-207ENST00000508499 ACRV1P26436 265 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 SSTR1P30872 391 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 MC4RP32245 332 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 RABIFP47224 123 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 LEPRP48357 1165 aaKnown RBP8.57□□□□□ -1.04
USP46-207ENST00000508499 PXNP49023 591 aaPredicted RBP8.57□□□□□ -1.04
USP46-207ENST00000508499 KIAA1024LP59773 190 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 GSTM4Q03013 218 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 IRF4Q15306 451 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 KYNUQ16719 465 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 ATP13A5Q4VNC0 1218 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 LDLRAP1Q5SW96 308 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms