RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 MAPK4P31152 587 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 STX2P32856 288 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 ABCD1P33897 745 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 RYKP34925 604 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 EIF3BP55884 814 aaKnown RBP4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 CRYMQ14894 314 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 VEPH1Q14D04 833 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 ESCO2Q56NI9 601 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 ZNF766Q5HY98 468 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 FAM160B2Q86V87 743 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 KCNH5Q8NCM2 988 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 CCDC191Q8NCU4 936 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 KLHL29Q96CT2 875 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 ELP4Q96EB1 424 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 CNDP2Q96KP4 475 aaKnown RBP4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 SPATA17Q96L03 361 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 ZMAT2Q96NC0 199 aaKnown RBP4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 SIN3AQ96ST3 1273 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 MXD3Q9BW11 206 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 PHF7Q9BWX1 381 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 SIL1Q9H173 461 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 SH2D4AQ9H788 454 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 KAT14Q9H8E8 782 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 SLCO3A1Q9UIG8 710 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 ZHX1Q9UKY1 873 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 VDAC3Q9Y277 283 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 ADGRF5Q8IZF2 1346 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 TEX22C9J3V5 150 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 KLRF2D3W0D1 207 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 WNT9BO14905 357 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 ZIC3O60481 467 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 BEST1O76090 585 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 KDM4BO94953 1096 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 RPN1P04843 607 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 POU1F1P28069 291 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 BSGP35613 385 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 PIGAP37287 484 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 NNMTP40261 264 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 LMAN1P49257 510 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 RPL7AP62424 266 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 PMP22Q01453 160 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 PTP4A2Q12974 167 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 STK4Q13043 487 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 ACVR2BQ13705 512 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 TNFAIP1Q13829 316 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 MED22Q15528 200 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 TAF11Q15544 211 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 TMEM266Q2M3C6 531 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 SOWAHAQ2M3V2 549 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 AMZ1Q400G9 498 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 SERTAD4-AS1Q5TG53 156 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 TMEM154Q6P9G4 183 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 CYP20A1Q6UW02 462 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 C17orf99Q6UX52 265 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 GSTA5Q7RTV2 222 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 KIAA2013Q8IYS2 634 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 FRMD1Q8N878 549 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 LNX1Q8TBB1 728 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 CREB3L4Q8TEY5 395 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 ZNF501Q96CX3 271 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 ZNF570Q96NI8 536 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 BRF2Q9HAW0 419 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 ZCCHC17Q9NP64 241 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 MRGBPQ9NV56 204 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 DDX43Q9NXZ2 648 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 MPP6Q9NZW5 540 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 PEMTQ9UBM1 199 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 SLC25A10Q9UBX3 287 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 CHORDC1Q9UHD1 332 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 CDC14AQ9UNH5 594 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 KCNE2Q9Y6J6 123 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 RUSC2Q8N2Y8 1516 aa4.19□□□□□ -1.74
TRAPPC13-209ENST00000508304 CPED1A4D0V7 1026 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 HSPB2A8KAH6 182 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 EXTL3O43909 919 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 SEC14L2O76054 403 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 URODP06132 367 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 HSP90AB1P08238 724 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 CLTBP09497 229 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 RARGP13631 454 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 SAT1P21673 171 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 MARK3P27448 753 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 EIF2DP41214 584 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 RGS2P41220 211 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 NR0B1P51843 470 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 BRWD1-AS2P59051 145 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 PRAMEP78395 509 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 BECN1Q14457 450 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 RASA2Q15283 850 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 HSPB2Q16082 182 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 PPP6R3Q5H9R7 873 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 SLC26A9Q7LBE3 791 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 SZRD1Q7Z422 152 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 TADA2BQ86TJ2 420 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 GPAT4Q86UL3 456 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 SFR1Q86XK3 245 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 SCCPDHQ8NBX0 429 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 C11orf65Q8NCR3 313 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 TAS1R2Q8TE23 839 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 C3orf30Q96M34 536 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms