RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CCM2LQ9NUG4 571 aaPredicted RBP10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 FBXL12Q9NXK8 326 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 BABAM2Q9NXR7 383 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 BFARQ9NZS9 450 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 BTNL2Q9UIR0 455 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 LRFN2Q9ULH4 789 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 DICER1Q9UPY3 1922 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 EFCAB7A8K855 629 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 IL18RAPO95256 599 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 AGR2O95994 175 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 TNNC2P02585 160 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 LCKP06239 509 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 FDX1P10109 184 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 FCGR1AP12314 374 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 IL1R1P14778 569 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 ADRA1DP25100 572 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 IVDP26440 423 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 RPL35P42766 123 aaKnown RBP10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 KCNC1P48547 511 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 PGDP52209 483 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 SNAP25P60880 206 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 ABCE1P61221 599 aaKnown RBP10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 BEX3Q00994 111 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 PRKCDQ05655 676 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 CHRNDQ07001 517 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 DMP1Q13316 513 aaPredicted RBP10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 BFSP2Q13515 415 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 RAPSNQ13702 412 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 EFR3AQ14156 821 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 GRM7Q14831 915 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 NTRK3Q16288 839 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 CTF1Q16619 201 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 UBE2SQ16763 222 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 SLC36A3Q495N2 470 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 MARCH8Q5T0T0 291 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 FAM171A1Q5VUB5 890 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 BROXQ5VW32 411 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 TIGD7Q6NT04 549 aaPredicted RBP10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 SLC27A4Q6P1M0 643 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 TRIM72Q6ZMU5 477 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 STRA8Q7Z7C7 330 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 BANPQ8N9N5 519 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 AVL9Q8NBF6 648 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 OR2T34Q8NGX1 318 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 PSMA8Q8TAA3 256 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 AP2M1Q96CW1 435 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 GPRASP2Q96D09 838 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 SUCLG2Q96I99 432 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 ZNF285Q96NJ3 590 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 ZSWIM1Q9BR11 485 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 SLC22A4Q9H015 551 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 COQ10BQ9H8M1 238 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 UNKLQ9H9P5 680 aaKnown RBP10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 COPS7BQ9H9Q2 264 aaPredicted RBP10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 POLE4Q9NR33 117 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 WWOXQ9NZC7 414 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 ZNF224Q9NZL3 707 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 CD274Q9NZQ7 290 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 PSMC3IPQ9P2W1 217 aaPredicted RBP10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 COG5Q9UP83 839 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 AP4E1Q9UPM8 1137 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 ANKRD6Q9Y2G4 727 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 PCDHB3Q9Y5E6 796 aa10.77□□□□□ -0.68
PDLIM5-210ENST00000508216 EXOC1LA0A1B0GW35 172 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 FAM221BA6H8Z2 402 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 KRT87PA6NCN2 255 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 STX16O14662 325 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 INPPL1O15357 1258 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 KLRC4O43908 158 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 KLHL18O94889 574 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 KCNH1O95259 989 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 BPNT1O95861 308 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 PLGP00747 810 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 CRYABP02511 175 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 BMP2P12643 396 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 SPNP16150 400 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 CTPS1P17812 591 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 FGFR2P21802 821 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 ATP2B4P23634 1241 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 GPC1P35052 558 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 ACOT2P49753 483 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 ATP12AP54707 1039 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 SLC18A2Q05940 514 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 BTN1A1Q13410 526 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 AP5B1Q2VPB7 878 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 XKR9Q5GH70 373 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 RALGPS1Q5JS13 557 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 FAM83BQ5T0W9 1011 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 MROH9Q5TGP6 573 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 XAF1Q6GPH4 301 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 CRTC3Q6UUV7 619 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 ZYG11AQ6WRX3 759 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 FRMD7Q6ZUT3 714 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 METTL4Q8N3J2 472 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 SFRP1Q8N474 314 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 EIF4E3Q8N5X7 224 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 TTC29Q8NA56 475 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 GPR156Q8NFN8 814 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 DYNC2LI1Q8TCX1 351 aa10.77□□□□□ -0.69
PDLIM5-210ENST00000508216 HEXDCQ8WVB3 486 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms