RNA–Protein interactions for RNA: ENST00000507516.3

COL6A4P2-203, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 738 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-203ENST00000507516 MAN1A1P33908 653 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 LIG3P49916 1009 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 RNASE9P60153 205 aaKnown RBP9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 ILF3Q12906 894 aaKnown RBP eCLIP9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 ERAP2Q6P179 960 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 LRIG3Q6UXM1 1119 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 CEACAM20Q6UY09 585 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 SLFN11Q7Z7L1 901 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 KLHL7Q8IXQ5 586 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 SRRM1Q8IYB3 904 aaKnown RBP9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 ARFGAP2Q8N6H7 521 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 UBL4BQ8N7F7 174 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 BMPERQ8N8U9 685 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 C1orf131Q8NDD1 294 aaKnown RBP9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 NT5C3BQ969T7 300 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 FAM81BQ96LP2 452 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 TBCBQ99426 244 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 CTRCQ99895 268 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 SH3GL2Q99962 352 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 ZPBPQ9BS86 351 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 RAB17Q9H0T7 212 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 ISCUQ9H1K1 167 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 UBE2TQ9NPD8 197 aaPredicted RBP9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 PCDH12Q9NPG4 1184 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 FAM114A2Q9NRY5 505 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 TMEM51Q9NW97 253 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 SMARCAL1Q9NZC9 954 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 TMEM9Q9P0T7 183 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 PPARGC1AQ9UBK2 798 aaKnown RBP9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 NFU1Q9UMS0 254 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 PACSIN2Q9UNF0 486 aaPredicted RBP9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 PCDHB3Q9Y5E6 796 aa9.43□□□□□ -0.9
COL6A4P2-203ENST00000507516 OTOGQ6ZRI0 2925 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 PRSS38A1L453 326 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 RAMP2O60895 175 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 TMCC1O94876 653 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 PIGNO95427 931 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 CLDN1O95832 211 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 HOXC4P09017 264 aaPredicted RBP9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 CCNB1P14635 433 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 USP8P40818 1118 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 STAT5AP42229 794 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 MAPKAPK2P49137 400 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 PPM1FP49593 454 aaPredicted RBP9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 RHOAP61586 193 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 MC2RQ01718 297 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 SQSTM1Q13501 440 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 UGP2Q16851 508 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 SLC25A52Q3SY17 297 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 PTPN20Q4JDL3 420 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 C11orf63Q6NUN7 778 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 RWDD4Q6NW29 188 aaKnown RBP9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 TMEM71Q6P5X7 295 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 GJB7Q6PEY0 223 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 NRROSQ86YC3 692 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 RASGEF1CQ8N431 466 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 RUNDC3BQ96NL0 473 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 AGPAT1Q99943 283 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 NCAPGQ9BPX3 1015 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 CAPS2Q9BXY5 557 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 GSDMCQ9BYG8 508 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 MAGEH1Q9H213 219 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 CARD9Q9H257 536 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 WDR26Q9H7D7 661 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 SUDS3Q9H7L9 328 aaPredicted RBP9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 CARS2Q9HA77 564 aaKnown RBP9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 NDFIP2Q9NV92 336 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 TAAR2Q9P1P5 351 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 TMEM59LQ9UK28 342 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 TLK1Q9UKI8 766 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 TTC7AQ9ULT0 858 aaPredicted RBP9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 POLHQ9Y253 713 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 UTP11Q9Y3A2 253 aaKnown RBP9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 MFHAS1Q9Y4C4 1052 aa9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 TMEM184BQ9Y519 407 aaPredicted RBP9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 MRPS18BQ9Y676 258 aaKnown RBP9.42□□□□□ -0.9
COL6A4P2-203ENST00000507516 TSPAN11A1L157 253 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 ZSCAN5CA6NGD5 496 aaPredicted RBP9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 A8MU76 341 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 HMGB1P1B2RPK0 211 aaPredicted RBP9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 AGPSO00116 658 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 PPM1DO15297 605 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 INSIG1O15503 277 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 RAD51CO43502 376 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 KDELR3O43731 214 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 SHOX2O60902 331 aaPredicted RBP9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 RECQL5O94762 991 aaPredicted RBP9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 PDGFAP04085 211 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 RHOQP17081 205 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 HSPA9P38646 679 aaKnown RBP9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 MMP12P39900 470 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 CARSP49589 748 aaKnown RBP9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 PMS2P54278 862 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 HADHBP55084 474 aaKnown RBP9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 GPLD1P80108 840 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 ERV3-1Q14264 604 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 EIF2S3LQ2VIR3 472 aaKnown RBP9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 SNAP47Q5SQN1 464 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 SEL1L2Q5TEA6 688 aa9.41□□□□□ -0.9
COL6A4P2-203ENST00000507516 SLC30A9Q6PML9 568 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms