RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 GLMNQ92990 594 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 GLYATL1Q969I3 302 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 LINC00615Q96LM1 132 aaPredicted RBP8.41□□□□□ -1.06
PDGFC-205ENST00000506880 SERPINB12Q96P63 405 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 KRT12Q99456 494 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 CDC6Q99741 560 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 FAM118BQ9BPY3 351 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 WRAP53Q9BUR4 548 aaKnown RBP8.41□□□□□ -1.06
PDGFC-205ENST00000506880 TSSK1BQ9BXA7 367 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 SLC13A1Q9BZW2 595 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 MIR1-1HGQ9H1L0 117 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 CD93Q9NPY3 652 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 NSMCE4AQ9NXX6 385 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 UBP1Q9NZI7 540 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 KLHL42Q9P2K6 505 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 SPASTQ9UBP0 616 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 CORO1CQ9ULV4 474 aaPredicted RBP8.41□□□□□ -1.06
PDGFC-205ENST00000506880 COMMD10Q9Y6G5 202 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 SLC30A1Q9Y6M5 507 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 MYO15AQ9UKN7 3530 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 PLXNB3Q9ULL4 1909 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 TMEM131Q92545 1883 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 LAMA1P25391 3075 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 IGLV3-16A0A075B6K0 115 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 C17orf113A0A1B0GUU1 675 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 LNP1A1A4G5 178 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 LMO7DNF2Z398 122 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 PLK4O00444 970 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 CHUKO15111 745 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 KPNA5O15131 536 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 SRP72O76094 671 aaKnown RBP8.4□□□□□ -1.06
PDGFC-205ENST00000506880 TNFP01375 233 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 CFIP05156 583 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 CTPS1P17812 591 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 ENGP17813 658 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 PGAM1P18669 254 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 OGNP20774 298 aaKnown RBP8.4□□□□□ -1.06
PDGFC-205ENST00000506880 CSRP1P21291 193 aaKnown RBP8.4□□□□□ -1.06
PDGFC-205ENST00000506880 MAT2AP31153 395 aaKnown RBP8.4□□□□□ -1.06
PDGFC-205ENST00000506880 NSG1P42857 185 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 MAPK9P45984 424 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 NUMBP49757 651 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 DUSP3P51452 185 aaPredicted RBP8.4□□□□□ -1.06
PDGFC-205ENST00000506880 HK3P52790 923 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 PRAMEP78395 509 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 DMPKQ09013 629 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 GTF2H3Q13889 308 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 INPP5AQ14642 412 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 AASDHQ4L235 1098 aaPredicted RBP8.4□□□□□ -1.06
PDGFC-205ENST00000506880 WASH2PQ6VEQ5 465 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 CENPUQ71F23 418 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 SDCCAG8Q86SQ7 713 aaPredicted RBP8.4□□□□□ -1.06
PDGFC-205ENST00000506880 GLRX5Q86SX6 157 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 TSPAN33Q86UF1 283 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 GKN2Q86XP6 184 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 FRMD1Q8N878 549 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 PHC3Q8NDX5 983 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 OR52K1Q8NGK4 314 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 ZNF398Q8TD17 642 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 ZFPM2Q8WW38 1151 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 CDKN2AIPNLQ96HQ2 116 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 SLC6A18Q96N87 628 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 HINFPQ9BQA5 517 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 TIMM29Q9BSF4 260 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 RTKNQ9BST9 563 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 SPATA16Q9BXB7 569 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 EBF2Q9HAK2 575 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 IL26Q9NPH9 171 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 WASH6PQ9NQA3 447 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 TREX1Q9NSU2 369 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 TMEM74BQ9NUR3 256 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 INTS10Q9NVR2 710 aaKnown RBP8.4□□□□□ -1.06
PDGFC-205ENST00000506880 NLGN3Q9NZ94 848 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 KLQ9UEF7 1012 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 MTRF1LQ9UGC7 380 aaKnown RBP8.4□□□□□ -1.06
PDGFC-205ENST00000506880 GGT7Q9UJ14 662 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 ANAPC5Q9UJX4 755 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 INVSQ9Y283 1065 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 ITM2BQ9Y287 266 aa8.4□□□□□ -1.06
PDGFC-205ENST00000506880 PRSS38A1L453 326 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 TTC24A2A3L6 582 aaPredicted RBP8.39□□□□□ -1.07
PDGFC-205ENST00000506880 POM121BA6NF01 834 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 BHMG1C9JSJ3 638 aaPredicted RBP8.39□□□□□ -1.07
PDGFC-205ENST00000506880 SLC30A4O14863 429 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 SCAMP1O15126 338 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 KMOO15229 486 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 TTI1O43156 1089 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 NUAK1O60285 661 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 SLC25A14O95258 325 aaPredicted RBP8.39□□□□□ -1.07
PDGFC-205ENST00000506880 PRAMEF1O95521 474 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 SOD1P00441 154 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 PNLIPP16233 465 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 CD9P21926 228 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 EPHA8P29322 1005 aaPredicted RBP8.39□□□□□ -1.07
PDGFC-205ENST00000506880 CHRNA4P43681 627 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 RPIAP49247 311 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 CSNK1EP49674 416 aaKnown RBP8.39□□□□□ -1.07
PDGFC-205ENST00000506880 SRP54P61011 504 aaKnown RBP8.39□□□□□ -1.07
PDGFC-205ENST00000506880 IRX4P78413 519 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 XIAPP98170 497 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms